Tag | Content |
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EnhancerAtlas ID | HS098-00436 |
Organism | Homo sapiens |
Tissue/cell | HSMM |
Coordinate | chr1:11967710-11969460 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Nkx3-2 | MA0122.3 | chr1:11968331-11968344 | TTTAAGTGTTTTA | - | 6.33 | ZNF143 | MA0088.2 | chr1:11967995-11968011 | TACCCACAATGCATTG | + | 9.63 | Zfx | MA0146.2 | chr1:11969285-11969299 | GAGGCCGAGGCGGG | - | 6.01 |
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| Number of super-enhancer constituents: 21 | ID | Coordinate | Tissue/cell |
SE_04401 | chr1:11967802-11970392 | Brain_Anterior_Caudate | SE_05426 | chr1:11967459-11970702 | Brain_Cingulate_Gyrus | SE_06308 | chr1:11966827-11970789 | Brain_Hippocampus_Middle | SE_07453 | chr1:11967402-11970810 | Brain_Hippocampus_Middle_150 | SE_08423 | chr1:11967438-11970628 | Brain_Inferior_Temporal_Lobe | SE_10739 | chr1:11967490-11970531 | CD19_Primary | SE_13010 | chr1:11967686-11969397 | CD34_Primary_RO01480 | SE_13630 | chr1:11967645-11970731 | CD34_Primary_RO01536 | SE_14236 | chr1:11967710-11969205 | CD34_Primary_RO01549 | SE_14675 | chr1:11967367-11971255 | CD4_Memory_Primary_7pool | SE_16078 | chr1:11967699-11970381 | CD4_Naive_Primary_7pool | SE_16518 | chr1:11967714-11970388 | CD4_Naive_Primary_8pool | SE_21206 | chr1:11967365-11970416 | CD8_Memory_7pool | SE_21842 | chr1:11967413-11970668 | CD8_Naive_7pool | SE_22216 | chr1:11967346-11970790 | CD8_Naive_8pool | SE_34570 | chr1:11966817-11970548 | HCT-116 | SE_40308 | chr1:11967553-11971272 | K562 | SE_54351 | chr1:11967622-11970499 | Spleen | SE_66899 | chr1:11967081-11970418 | H2171 | SE_67244 | chr1:11967631-11970544 | MM1S | SE_67657 | chr1:11967812-11970390 | u87 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr1 | 11968510 | 11969143 | chr1 | 11967830 | 11968200 |
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Enhancer Sequence | CAAGATAATT TTTTTTTTAC TTTTTTTTTT AAGTTCAAAA AAATTCTTTA CTTATTAGGC 60 TAATTGTGCA ATTAAAAAAA AAAAAAAATT GCAAAAACCG CAATTACTTT TGCACCGATC 120 TAATAGCTCG CCCACTGTAA GTAAAGCAGG TAAAGTCAGC CTTTTTCTTC TGGGACCAGA 180 CTCTGCTCTG CCCCGCGGTG GTGGCCTCAG GCGCAGCGCT AAAACGCATG AACCATTTAA 240 GGTATTTCCT GAAACTGGAG CGTGATTGGT GAGACTTTAT TTGCATACCC ACAATGCATT 300 GCGCACTAAA TAATGTTCGT CTTTAAAATT ATTTCCCCTT TTTCCTTCAA CATATCTTTC 360 TCGGAACCGA GATTGCTGTC CCAGAATTGT CTGAAGAAAA AGGCTGAAGT CAATAGCTCT 420 TTTGGGCCGA AGGAAAGTTA CCATTACCCG TTTAGGAGTA GCCGTTACCT GAGAACTGTA 480 GTGTCGACGA CTGATGTTAT ACTCTGGTTT CTCTTCAAAT CGTATAAATC TTTCGCCTTT 540 TACTAAAGAT TTCCGTGGAG AGAAACGAGT GTGAGTCTGA AACCAATTTT TTGAGGCCTT 600 GCGTTTCTTA GCAGGGCTTA TTTTAAGTGT TTTAAAAACA GATGCGATTC CGTTAAATCG 660 CGTGTGGAGC TATGTAAAGT GTATTATAGA ACAAATGCGA GTTACGGTTT TTCAGCTTTT 720 CGCTTTGTTA AGGTATGTGA TATCAATTGT ATTGCATTTC TGAGCAGTTA TAATATTAAG 780 ATGTTGGGGT GGCTTACTGC TTTTGACCAA GAAGTAGGGT TTGTTGGTTG ATTACACCAG 840 TGGTTTTTAA CCCCAGCCAC TGAGTGATGG AGGGTTACCG ACTCACAAGC GAGCATTAAC 900 GCCTGAGGTC CGCCTGCTGT CAGGGCAGCA AGGCATCAGA TTCTCCTAGG AGCGGGAACC 960 CTATTGTGAA CTGCGTATAC GAGGTATCTA GGTGCGTGCT CCTTTTAAGA ATCTAATGGC 1020 TGATGACGAG GGGCACAGTT TCAACCTGGA ACTGTCCACA CCCCCTACCC ACCTTCCCCC 1080 GCCCTTGGAA AAACTGCCTT CCATGAACTG GGTCCCTTGT GCCAGAAAGG TTGGGGACCG 1140 CTGGACTATC CGATCAAATG AAGCAGGGAC TCGGGGCGAG CTCCCCCGCT GCTCCCGCCG 1200 GCTTCTCCGT GTAGAATCGA AGAAGGCAGT CCCAAGGGCT CTTCTGCCCC GTATCCCCGC 1260 CTGAGGAGCG TGCCAGGCGC GCAGCTAGTC CTCCCCCGAC CCAACCGGTT TGATGAAACG 1320 CAAGAGAAAG TGAATTTTCC AGCCACTCCC ATTGGCCAGA ATTCGTCTCA GCCGCAAGGG 1380 AGGCTGGGAA GTGCAGTCAT GCCTTCAGGT AGCCGTGAGC CCTGCTAGCG ATAGGAGATT 1440 CTAGAGAGAG GTTGAGTACT GGGGAGGAAA AACTAGCAGG GTCTGTCCCA GTAAAGGAGG 1500 GAGGAAATCC ATCGCAAAAA ATCCTGACCC CCAGGCCGGG CGCGGTGGCT CACGCCTGTA 1560 ATCCCAGCAC TTTGGGAGGC CGAGGCGGGC GGATCACCTG CGGATCACCT GAGGTCAGGA 1620 GTTCGAGACT GGCCTGGCCA ACATGGAGAA ACCCCGTCTC TACTAAAAAT ACAAAAATTA 1680 GCCGGGCAGG AGGGCGCATG CCTGTAATCA CAGCCACTCG GGAGGCTGAG GCAGGAGAAT 1740 CGCTTGAACC 1750
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