EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS095-02968

Organism

Homo sapiens

Tissue/cell

HMEC

Coordinate

chr1:226878100-226878740

dbSUPER

Number of super-enhancer constituents: 46
ID	Coordinate	Tissue/cell

SE_00103	chr1:226872375-226881605	Adipose_Nuclei
SE_03159	chr1:226877952-226878821	Brain_Angular_Gyrus
SE_03869	chr1:226877757-226882020	Brain_Anterior_Caudate
SE_04801	chr1:226861989-226881516	Brain_Cingulate_Gyrus
SE_05781	chr1:226861906-226881699	Brain_Hippocampus_Middle
SE_06710	chr1:226871722-226882060	Brain_Hippocampus_Middle_150
SE_07746	chr1:226861943-226887535	Brain_Inferior_Temporal_Lobe
SE_08795	chr1:226878001-226878165	Brain_Mid_Frontal_Lobe
SE_08795	chr1:226878251-226878394	Brain_Mid_Frontal_Lobe
SE_08795	chr1:226878401-226878542	Brain_Mid_Frontal_Lobe
SE_08795	chr1:226878602-226878758	Brain_Mid_Frontal_Lobe
SE_10211	chr1:226877729-226880215	CD19_Primary
SE_10887	chr1:226873819-226893407	CD20
SE_11833	chr1:226877745-226880256	CD3
SE_13607	chr1:226877740-226879778	CD34_Primary_RO01536
SE_14432	chr1:226870280-226879585	CD4_Memory_Primary_7pool
SE_15456	chr1:226877358-226879712	CD4_Memory_Primary_8pool
SE_15808	chr1:226877331-226879822	CD4_Naive_Primary_7pool
SE_16345	chr1:226877639-226879732	CD4_Naive_Primary_8pool
SE_16856	chr1:226877530-226880445	CD4p_CD225int_CD127p_Tmem
SE_17296	chr1:226856971-226887803	CD4p_CD25-_CD45RAp_Naive
SE_17765	chr1:226858457-226887760	CD4p_CD25-_CD45ROp_Memory
SE_18263	chr1:226857891-226887822	CD4p_CD25-_Il17-_PMAstim_Th
SE_19160	chr1:226877754-226880761	CD4p_CD25-_Il17p_PMAstim_Th17
SE_20012	chr1:226877884-226880084	CD56
SE_21455	chr1:226877555-226879656	CD8_Naive_7pool
SE_21910	chr1:226869612-226880490	CD8_Naive_8pool
SE_22315	chr1:226877646-226882812	CD8_primiary
SE_25774	chr1:226872235-226882424	Duodenum_Smooth_Muscle
SE_26570	chr1:226877920-226879867	Esophagus
SE_29606	chr1:226877938-226881512	Fetal_Muscle
SE_31634	chr1:226877912-226878722	Gastric
SE_40782	chr1:226877780-226881283	Left_Ventricle
SE_42228	chr1:226877856-226881259	Lung
SE_48218	chr1:226877807-226878423	Psoas_Muscle
SE_48643	chr1:226877921-226878740	Right_Atrium
SE_50140	chr1:226877824-226879880	Sigmoid_Colon
SE_52562	chr1:226877869-226879999	Small_Intestine
SE_53341	chr1:226877868-226879968	Spleen
SE_54498	chr1:226861959-226882894	Stomach_Smooth_Muscle
SE_55112	chr1:226877981-226878478	Thymus
SE_58303	chr1:226819953-226937809	Ly1
SE_59629	chr1:226819233-226928465	Ly4
SE_60416	chr1:226819368-226929640	DHL6
SE_61009	chr1:226812849-226900772	HBL1
SE_62233	chr1:226813614-226929647	Tonsil

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I226686

chr1

226873707

226881670

Enhancer Sequence

CAACAAAGAA ATTCTGAGAC TGGTCCTGAT CTGGGGCTGT CAGGCTCCCA AACTGGTCCT 60
CTCATCCCCA CAGCAGCCTG CAGTAAACAC ACTCTCCAGG ACAGGAGGCT GAGGCAGGAT 120
AACTCACTCC TCCTACGTCA AGCACTCACC TCCTGTTTAC CCTTTCATCA AGAGGCTCTG 180
ACAAGCCAGT GGGCAGGGAG AGTTTCTTCA GATATAAAAC AGGACTTTTC ATAACCCTAG 240
TATTTACGTC AACTGAGAAG GACAGACACT CAGACACAGT CGCACACACT TCACTCACAC 300
ACAGGACCGT CAATTCAACG TGTCCACCTA CCTCACAAGC AGGCAGGGAA ATCAGGCCTG 360
CATCTCAACA CGTCAAAACT AGTTTCCTGC AATAGCCAAA AGGTGGAAGC AAGCCAAGTG 420
CCATCGGCAG ATGACTGGAT AAACAAAATG TGATATAGAC ACACAATGGA TTATCATTCA 480
GCCTTAAAAG GGAAGGAAAT TCTGACACAT GCTACAACAG GGATGACCCT TGAGCACATT 540
ATGCTCCATG AAATAAGCCA GACACAAAAG GACAAACGCT GTATGACTCC ACTTATCCCA 600
AGTACCGAAA ATAGGCAAAT TCACAAAGAC AGAAAAGTAG 640