EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS095-00175

Organism

Homo sapiens

Tissue/cell

HMEC

Coordinate

chr1:8100390-8101750

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1

MA0050.2

chr1:8101175-8101196

TCTTTCTTTCTTTTTTTGTTT

6.13

dbSUPER

Number of super-enhancer constituents: 14
ID	Coordinate	Tissue/cell

SE_01874	chr1:8099666-8101052	Aorta
SE_26425	chr1:8099767-8101609	Duodenum_Smooth_Muscle
SE_33765	chr1:8099879-8101573	HCC1954
SE_34231	chr1:8099554-8102426	HCT-116
SE_34846	chr1:8099891-8101213	HeLa
SE_36931	chr1:8099699-8101977	HSMMtube
SE_45858	chr1:8099933-8101698	Osteoblasts
SE_47106	chr1:8099395-8101831	Panc1
SE_51696	chr1:8100193-8101440	Skeletal_Muscle_Myoblast
SE_52775	chr1:8100403-8100987	Small_Intestine
SE_54897	chr1:8099700-8101657	Stomach_Smooth_Muscle
SE_55872	chr1:8098984-8102769	u87
SE_63484	chr1:8100182-8101259	HSMM
SE_67534	chr1:8098984-8102769	u87

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I008039

chr1

8099908

8101624

Enhancer Sequence

TGTAAATTAC ACCAAAATCT AATTGTAGTC CCATTTTCTC TCCTGGCCTG TAGTCCCTTT 60
TTTTTTTTTC TCCTGGCCTT TAATCCCATA TTTTTAATTT CTTACCAGTG CATCTCTCCT 120
GGATATTTGT TGCAGACTGG CTTCTTGGCA AGCAGTCTTT GAGATGGAGA TGAACATGGA 180
GGACATTTAT TAGAGTGTTG AAGGAAGGGT GAGGAAAAAG AATTGGGCAG AGGGAGAAGT 240
TAAGTTGTGA TCCATGTACG ACATAGGCCT TAGCTAACTA CATGCAAAGC TCTGGAACAG 300
GATTGACCCT TTGGAGTTGT CCTAACTTGG GCAAGAGAGC TGGACCTTTT TTCCTCTAAC 360
TCTTATTGGT CAGTCATTGA TATGGCTTGC CTTTGGAAGG AAGAGTAAGC TTGGAAAAGG 420
CAGTTTTCTT CAGCTGAGTC ACTCTCCAAA CAGGGTTGAC AGCTAAGGGC CATGTTCTGG 480
CAGCATTCCC AGGAGCTTGA GGAATAAGGC TTTTCATAAC TCATTGGGGA TCTGGGTAGC 540
TCATCATGGA AACTTCCTTT TGTTCTCTCT GTTGTTAGTT TATCCTTCCT CACTCCATTT 600
TCCTAGTAGT TTTGTTGATG TTTCTACTTT GATATTTTGA GGCTATATTA TTCAGAGCAT 660
ACATGTTTAG AATTGTTAAA TCTGTCTGAT AAATCCAACA TTTTGTTAAT TTGTAGTAAG 720
CCTCTATCTC TAGTAATAAT TTTTGCATTA AAGTCTATTT TGTTTGATAC TTCTTTTCTT 780
TACTTTCTTT CTTTCTTTTT TTGTTTTGTC TTGTTTTGTT TTGGGACAAA GTCTCACTCT 840
GTGGCTTAGG CTGGACTGCA GTGGCATGAT CTTAGCTCAC TGTAACCTAT ACCTCCTGGG 900
TTTAAGCGAT TCTTGTGTCT CAGCCATCTG AGTATCTGGG ATTACAGGTG TGTGCCACCA 960
TGCCCAGCTA ATTTTTTGTA TTTTTAGTAG AGACAGAGTT TTGCCATGTT GGCCAGGCTG 1020
GTCTCAAACT CCTGGTCTTG AGTGATCTGC TTGCCTCAGC CTCCCAAAGT GATGGGATTA 1080
TAGGCGTGAG AGACCACGCC TGGCCTGTTT GATATTTCTG GAGTCACAAT GGCTTTCTTT 1140
TGGTTAGTAC TTTGGTGTAT TTTTTTCTAA AATTTTCTTT TTACTCTTTG GGTGTCCTTA 1200
AGTTTTTGGT CTGTTTTATA AACAGCGCAG AGCTGGATTA AAAAAATCTT TGTCTTCCAT 1260
TGGTGAGTGT AGTTCACTTA TAATTATTAT GATTACTGAT ATATTTTACT GATAATTTCA 1320
ATCATTTATA CCATGCTATT TTGAACTGTC TATTTGTCTT 1360