EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS094-03599

Organism

Homo sapiens

Tissue/cell

hMADS-3

Coordinate

chr1:219965280-219966740

Target genes

Number: 5
Name	Ensembl ID

RN5S76	ENSG00000252086
BPNT1	ENSG00000162813
IARS2	ENSG00000067704
snoU13	ENSG00000238576
SNORA36B	ENSG00000222370

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Crx	MA0467.1	chr1:219965439-219965450	AAGAGGATTAA	+	6.14
RORA(var.2)	MA0072.1	chr1:219965836-219965850	AATAATTAGGTCAA	+	7.12

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I219791

chr1

219964551

219966504

Enhancer Sequence

GCAGTTGCAC TCCAAGGCTT CACAGAGGGA ATGTGGCATG CTGGTCCCAT TCTGTGTTTG 60
ATTTGCTTGA TGGTAATAGG AGAGTTATTT CAACTCTCTT TCTCCATTTC TCCATCCCTT 120
AGGAAAAAAA GATCATTTTA ATCCTTCAAT AGAGCATCCA AGAGGATTAA GAAATAATAA 180
GGTCTCTATG TGAAAAGTCC TCCATTGTAC CCATAGAGAT TTCATCGATT ATTAATAAAA 240
ACACCCCAAG GCTTCCATTT TTCCTTGGAT TCTGAGTATG TGGTTACTTT TGTTCATGGC 300
ATCCAATGGT AAGTTAATTT TATTAAGAAC ATTTTTAGAA AGCTACAATG TCAGAAGTTG 360
ACACTACTCT CTTTCCAGTC CTCTATTCTT GGTAACATCA TTAAACATCA GCTGGCCCCA 420
AAGGCAAGTT GCACCTTTTT TTAATCTAAC AGCCATTCTG TGGATAGCAT TTGTTTTCCA 480
TTGCTGCCAA GGAGACAATC TGGCTCTCAT TTCCTTTGAA GAAGAGCCCA TTATGATGAG 540
TCAGGTCTAC ACTGGGAATA ATTAGGTCAA ATAAATGAGC CCTTCCAGCT GCCTATAGCA 600
TCACTCAACA CCCCCCTGTT GCAGATGCAG GAGACATTTC TGGAGCAAAA GCAGAGTTTA 660
TCTGTTGTGA GTTACCCCTT CCACTTGCCC AAGGGATGCT ATCAAAACAT ATGCAAGGTA 720
ATTATGGCTC CTCTCTTTGC ATCTGGAAAA GTGAAAACTG ATCCATAAAA TCGCATGGAG 780
ATCTCATTGT CTTTCTGCCC TACCAGAGAA GGCTCCTGCA GCATGAGGAA ATAAGAACCA 840
GCTGACAAGC TCGGGCAAGA CTCCTGCCTT GTGTCACATT TGCCCTCATG GTCTCCCAGC 900
CACCTTATCC TCAGTTGTCA TGTCCACTGG CAGGAGAAAA AGGAAATTCA ATGATGTTGG 960
AGTCATGTAC CAGCCCTTTT TAGTATTCCA CTTGAGCCGA TATCTGCAGC TCATCACTCA 1020
GGCAAGCATC TGGCCCAGCC ACCTCCACAA CTCACACTCT CAGGCAGTTT TCTTTTGTGT 1080
TCAACATCTC ATATACACAA TAGGAGACTA ATCTGGGGCT GAATTAGAAA TACAAACTGC 1140
TATCCAAGTT AAAGATCTCC CCTGCGCCGA TCTGGGTACC AGAAAGTGGA AAATGAAGAT 1200
TAAAAACCAT ATATAGAAAA AGCCTTTCAT CCAAGAGTCT CATTACTCAG AGAGAAAAAA 1260
GAATCTTCAG TTTTGTTTCT CTCTCTCAAC TTTATCAAAC CATTTAAAGA TTGCTATAAT 1320
GTAGGAACCC TCATGAGTTG CACCACCGAA TTCCACAACC TGGAATTTTA TACCTTACAT 1380
TAACATGGGT CACTGACCTC CTCAAAGGGG CTGATGATGC ATTTCAGGCT GGCCAGATCA 1440
TGTGCCTTTC CCAAGGAATA 1460