EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS094-02203

Organism

Homo sapiens

Tissue/cell

hMADS-3

Coordinate

chr1:120059740-120061190

Target genes

Number: 7
Name	Ensembl ID

RPS3AP12	ENSG00000236804
RP11	ENSG00000231365
WARS2	ENSG00000116874
NBPF7	ENSG00000215864
PFN1P9	ENSG00000227205
RP5	ENSG00000226446
NOTCH2	ENSG00000134250

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

DMRT3	MA0610.1	chr1:120060791-120060802	AATGTATCAAA	+	6.02
Esrra	MA0592.2	chr1:120060558-120060569	ATGACCTTGAC	-	6.32
Esrrg	MA0643.1	chr1:120060558-120060568	ATGACCTTGA	-	6.02

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I119517

chr1

120060321

120060470

Enhancer Sequence

TAAAGTCATA CTTATAGTTG GCAAAATAAT TCACCACAAG CAGATTGGGC AGACAGGGAA 60
CAAAACCAAC CTTCACCTTC ACCCTTAAAT GGTGTTGGAA TGTGTAAGCA TCTGTACCTC 120
TCTCATATAT GTCTCCCTAG CGTTGAGCAC TATACCCGGC ACTTGCCCAC TCAGCTGAGG 180
GGTGAACTTC CCAGGGGCTC TGCTCTCAAT GAGACACAGC CTTGGGGCCC GGGGAAGGCC 240
AGCCATACAC AGATGGTATC AGAACACCCA GGCAGAACCA CTCCCTACTT CAGCTATAGT 300
AGGTCCAGAA AAGCATCTCA GTGGAGTGTC TTCAGTGAAT AAAAAGAATG CATTGAACTA 360
CTTTCAATGA ATCCCTGGTC TCCAGGAACT GAACTCTGTC AGTCCTTTTA CTAGTGTTGA 420
ACATTCTTCA AATATATGTA TGGGAATGCC AGCTTGAACA CAGCATGTAC ACTTATACCT 480
TTTTCAAATT TCTTAAACAG AGGGAAACAT GGGATACAGA ACAACTTGCT GCCCACCTCA 540
TTGGCTTCCA AAGCTGAGCA TTCCTGGCTG CTGGAATGAG GCAGGGCACC AGCTGGATAT 600
AGAGAGCACT GAGAACAGTG GCCTGGATCT CAGGGGAACA GCTGGCAATT GAAATCCATT 660
GGAATGTGCT TTGGGTTAGC AGAGATGGCC TGGATCTCAG GGGAACAGCT GGCAATTGAA 720
ATCTATTGGA ATGTGCTTTG GGTTAGCAGA GATGGCCTGG ATCTCAGGGG AACAGCTGGC 780
AATTGAAATC CATTGGAATG TGCTTTGGGT TAGCAGAGAT GACCTTGACA CTGCAGTCTG 840
GCAGCAGAAA ACTGCAATCT GCATGGCACT TGAGGTTGTG ACAGGGAGAC AGGGGAATAA 900
GCATTAACAG CAAAGCTAGA GATAGCTGGG CACTAAGGCT CATGTCTATA ATCCCAGAAT 960
TCTGGGAGGC CAAGGCAGAA GGATCACTTG AGCCTAGAAT TTCAAGATCA CCCTGGGCAA 1020
CATAGGGAGA CTCCATCTTT ACAAAATTAA AAATGTATCA AAAGCCAATC AGGGCTTGGT 1080
GGTGTGCACC TGTGGTCCCA GCCACTCCCA AGGCTAAGGT AGTAGAATCA CTTGGCCTGG 1140
GAAGTTGAGG ATCATGCCAC TGCACTCCAG TACTCTGAGT GACAGAGCAA GACGCTGTCA 1200
GAAAATAAGA AAACAATAAA AAAGGAAAAA AGGTTAGAGA AAAAAAAGAA TGTCTAAATG 1260
AATAATGTCA GCACTGGAAT CCCCATGATC TTTTGCTACT TGCCACACTC TGTTCTCCAT 1320
ACAACAGCCT GAGACATGTT TTTAAGTAAA TTCAAATCCT ATGCCCCACC TATTTAAAAC 1380
CTTTCTGTGG CTTCCCGATC CATTTACTAT ACGCTCTAAA CTGATCTCCA GCTCTCCTGG 1440
GCACTGCATG 1450