EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS094-02064

Organism

Homo sapiens

Tissue/cell

hMADS-3

Coordinate

chr1:112138150-112139310

Target genes

Number: 9
Name	Ensembl ID

DRAM2	ENSG00000156171
RP11	ENSG00000243960
ATP5F1	ENSG00000116459
WDR77	ENSG00000116455
C1orf162	ENSG00000143110
RAP1A	ENSG00000116473
RP4	ENSG00000215867
DDX20	ENSG00000064703
FAM212B	ENSG00000197852

dbSUPER

Number of super-enhancer constituents: 10
ID	Coordinate	Tissue/cell

SE_11566	chr1:112134159-112141350	CD20
SE_12350	chr1:112138410-112139892	CD3
SE_18422	chr1:112133211-112140333	CD4p_CD25-_Il17-_PMAstim_Th
SE_19860	chr1:112138199-112139568	CD4p_CD25-_Il17p_PMAstim_Th17
SE_22945	chr1:112134335-112141916	CD8_primiary
SE_32554	chr1:112138469-112147533	GM12878
SE_54875	chr1:112137684-112142066	Stomach_Smooth_Muscle
SE_58908	chr1:112130143-112173777	Ly3
SE_59762	chr1:112134662-112182784	Ly4
SE_62455	chr1:112130192-112176999	Tonsil

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I111595

chr1

112138140

112141848

Enhancer Sequence

AACACATGGC AAAGCTGAGG ATCTTTTTTG TTTTAACATA AAGGGTCATA TTGTCTCTTA 60
TTCTCATTTC TTATTGGAGC ATTCTGACAT CTTTATTTTG GGCTTCCCTG GTTAGGTTAC 120
CTGCTGGAGA GGTGTGTTTA GAGCTGCAGT TAGGGCAGCA AAAGCAGAGA GAGTTGGCAC 180
CAGTGAGGAT GGGCAGAGTT GGCTATGGAT ATAATCCATC ATTTGCCAAA TAGCTCAAAG 240
TTGTATGAAT ATCATTAAAT ATTTCATGTA AATGCTGTTT TTTTTCAAGG GCAAGTCCTG 300
TTTCATAGAA AATATAGTTC CCGAGCATAG TAAAGGAGCA TGTGCTCCAT ACTAAGCACT 360
TCTAAATGAT TATTTCATTT AAGAATCTCA ACAATTCAGA GTTAAGTGCT CTCTTCTCCA 420
GTTTGCACAT AGGACAATTA AACAGCAGAA AAGTAAAATA AGTTGCCAAG AGGACTTGCT 480
AATAAATGTT TGAGCCAACA TTAGAACATA GAGCTGACTT CAAAGTTTGT GATCTTTGCT 540
CTACATTATG CTGCCTCCCT TGTTAAACCT AACAGATAAA CATAAGTGCA ATTTTAAAAA 600
AGAGTTAATG CTTATTGATT AAAGGCAGGG CTTTCTCTGG GATCCAGGAG TCACCATTAT 660
GGGTAGGCAG GATCATTTAC AACATTCTTT TGAGGATCCC TTTAAAAAAA AAATGACCAC 720
TGGGTCCAGC CAGGTCAACA ATGGATGAGG AACTCTTCCA TGGAGTTCTG AAAGGCCCTA 780
CAGAGGCTCT GACAACAAGG AGGCCACAGG ACAGCTTCCA CCTCCCAGTT TTTCCTAGGC 840
CAATCCTTGG GACATAGTAT GGTTGATGGA AATGGAAACT ATTGCTTCTT GGTGCATTTT 900
TTAAAGGAAT GGTTAAATTA TAACGTAAGA GTCTGTTTTC CCACTAGACT TGAGTTTTAT 960
AATATCAGGG ACCATGTCTG TCTTCTTCAT TGCCATAGTC CCATTCCTTG TACAGTGCTT 1020
GGTCCATAGC AGATGATCTT AGTCCATTTG AGCTGCTATA ACAGAATGCC ATAGAGTGGG 1080
TAGCTTATGA ACATCAGAAA TTTATTTCTC ATAGTTCTGC AGGCTGGGAA GTCCCAAATC 1140
TGCAGTGCTG AGAGATGTGG 1160