Tag | Content |
---|
EnhancerAtlas ID | HS094-02020 |
Organism | Homo sapiens |
Tissue/cell | hMADS-3 |
Coordinate | chr1:110324290-110326620 |
Target genes | Number: 10 | Name | Ensembl ID |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
IRF1 | MA0050.2 | chr1:110326585-110326606 | TCTTTCTTTCTTTTTTTCTTT | + | 6.34 | Nkx3-2 | MA0122.3 | chr1:110325308-110325321 | TTTAAGTGGTTCA | - | 6.33 |
|
| Number of super-enhancer constituents: 7 | ID | Coordinate | Tissue/cell |
SE_00597 | chr1:110324351-110330372 | Adipose_Nuclei | SE_23201 | chr1:110325724-110326593 | Colon_Crypt_1 | SE_23812 | chr1:110326066-110326531 | Colon_Crypt_2 | SE_47298 | chr1:110324616-110338374 | Panc1 | SE_50503 | chr1:110325211-110326603 | Sigmoid_Colon | SE_52808 | chr1:110325237-110326616 | Small_Intestine | SE_61647 | chr1:110315761-110369789 | Toledo |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr1 | 110325124 | 110325572 | chr1 | 110326051 | 110326288 |
|
| Number: 2 | ID | Chromosome | Start | End |
GH01I109780 | chr1 | 110322708 | 110324304 | GH01I109782 | chr1 | 110324801 | 110326644 |
|
Enhancer Sequence | TTGCCTCATC TTATTCCCCA AGGAACCACT CTTAACAATT TCTTATTTAT CCCTAAGATA 60 TTTCTATGTA TATAGACAAG CACGTATAGC TACAAGTCAC TATATGTGCT TTGTAAAAAA 120 TATATACAAA TGGGATCATA TCATAACAAT AATGTAACCG TGTTATTTTG CAGCTTGCTT 180 TTTTCACTTA ATGTCAGATC TTGGACCTCT TTTTCATGTC GATATCTGTA GATCTACTCA 240 TTTTTTTTGT AGTGACTATA AAAAGTTCAT TGTAAAGATG TGACTGACCA GTTCCTTTTT 300 TAATGGAGAT TTATGCTGCT TAGGTTTTGC TAAGGCAAAC AGTTCTAAGA TGAACAACTA 360 TGTTTGTAAA TTAATTGCCA GCTGACTAAT AATGTGTGTG TTTAAAATGT GAACATGTGT 420 TCCCAGATTG CCTTTCAAAA ACACTATAAC AATTTATAGT CCCACTAATA GTGTATGAAA 480 ATGCCCATTT CCTTATATTT GCACCAACAC TGATACTATC AAACTTTTAA ATCTTTGCTA 540 ATTTGACAGA TGAAAAATGG TAAAAATTTA AAAATTTTGA AAATTTAAAT GCCTTTAAAA 600 GTAAGGCTGA GCATTTAAAA AAATATATCT TGGCTATTTA AACTTCTTTT TCTTTCTTTT 660 TTGTGAATCC CATGTGTAGA GGGATTTTTT GAGACAGCTA TTCTTTTTCT CACTGATTTG 720 TAGAAGCTCT TTGTGTATTA AGGAAATGTC TCTAAAATTC ATTTTCTTAG TTCTTTCACT 780 ACAAATTCTA TGTTTTAAAA GGTTTTGTTA AATAGCAGTT GCCAAGTTAT TAGTTCTTTT 840 TCTGTTTTCT CCATCTGACC CATGTATACT TAACCTCAAA TATTTATCTG TACAGATAGC 900 CAATGTTTCT GCATTGAGTT GATGTAATTC CAGCCAAAAG CAAAGCATTG GAATTTTTGT 960 TAATCCCAGA AATCTCACCA TGGCTAAATG TAGAGTATCC ATTGGTTTTC TGAAATATTT 1020 TAAGTGGTTC AAGGAACCCT GGAGGCCTGG GGCCCTGGAT GGGAGCCACA GCCTCTGATT 1080 TAGCCCTTTA GCTAGCACTT CCTTGGGCCA GCCCAGCTCA CTCAAGCCAG CAGTTTGGTC 1140 AGCACCTGTG TGCACCCCTC TGGCCAGCTG TGGATTCTTC TATTCAGGTG AATGGGCCGG 1200 GTGTTTGCAT ATTTTCCCCT TTGTTTATAG GCACTTATAG ATGTGAGTCC CTTTTCCCTT 1260 TAGCAGATGG TCCCTGAGGC AGGACTGAAC CTGCCCTAGG CCAGCCCCAG TGGGACTTTA 1320 CTGGGGGTTA AGGAGGAGAT GGAGGAGTGC GGTGTGGGGC GGACAGAATG GGGCTCACCC 1380 TTAGAGCCTC CCAGCTGGCC CCCACCCCCG CTGCCCATCC TTCAGCCTCC CTACTTTCTT 1440 GAAGAAATGT TGCCAGACCC ATGTCCTATT CCCTTAAGGG TAGGTGTGGG CCTCTGGGCA 1500 AGTTGGGAGG GGGTTTGCAG AGCCCCAGAT TGGAGAGTGG AAGGCTGGAC ACCACTCTCC 1560 AAATATGGGC CTGTGTGTCC TAAGTAGGCG TTAGAGGCAT AGATGGGTGG TGGGGAGGGG 1620 GTGTCCTGGG AAGGGGAGGT AGCTTTCAGG CTTCTGGAAA CTCACCCCCC AATCTAAAGG 1680 CAGCTTCACT GTGTTCGGGA TTGTGTGTGG GGTAAGGTGG TAGTGCTGAG CTTGCAGGTG 1740 TTGGGGTGGG AGAAGAAGAG AGGCCAGAAA CCTGCCCCTG ATTCCTGACC TGTCTGAGCC 1800 TCTGCGGCTG ACTTAGAGGC TTCCGGGTTT GTTTGTTGTT TTAACCCAGG GCTGACTTTT 1860 AAGAGACTGC CACATTCCTA AGGGATTGGC AAGTGAAGGT GATGAATGGG GTTGGCAGGA 1920 GGCAGAGTCT GAGGAAGTCA ACAAGAACTC CAAGTTGACG CCCGGGAGCC CAGGTTCCCA 1980 GTGCTGTGGC CAGGCGTCCT GTCGGAGGAC TGGTACCCCC GCTGACCCTG GTGGGTGGGG 2040 AAGGAGACCT TGGGCTCTGA AAAATCCCCT TTCTCTTCCC ATGAATGTCC CCCAGCCTTC 2100 CTGGGCTGCT CTGTGGGCAT TAGGGTTGGC CCTGTTCTTT GCCTCGGGTC ACAGCTCTCC 2160 TGCCCCACTG GGGCGACCCA AGCCTGGGAG TGGGCACAGC AAGGGTAAGG GCTGAGGCTG 2220 GCAGACCTGG GTCTGTCCCC TGGAAATATG CCTCGGTGGC AAATGACTCC CCAGAGATGC 2280 CTGAGATTTT TCTTTTCTTT CTTTCTTTTT TTCTTTGCTT TGTAATTAGT 2330
|