EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS094-01993

Organism

Homo sapiens

Tissue/cell

hMADS-3

Coordinate

chr1:109583800-109584480

Target genes

Number: 23
Name	Ensembl ID

PRPF38B	ENSG00000134186
STXBP3	ENSG00000116266
GPSM2	ENSG00000121957
CLCC1	ENSG00000121940
RP11	ENSG00000244716
WDR47	ENSG00000085433
RANP5	ENSG00000228054
TAF13	ENSG00000197780
TMEM167B	ENSG00000215717
SCARNA2	ENSG00000238881
RP5	ENSG00000251484
KIAA1324	ENSG00000116299
C1orf194	ENSG00000179902
SARS	ENSG00000031698
CELSR2	ENSG00000143126
PSRC1	ENSG00000134222
SORT1	ENSG00000134243
PSMA5	ENSG00000143106
SYPL2	ENSG00000143028
ATXN7L2	ENSG00000162650
CYB561D1	ENSG00000174151
GNAI3	ENSG00000065135
GSTM2	ENSG00000213366

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RFX5	MA0510.2	chr1:109584418-109584434	GGTGACCATGGCAACC	+	6.19
RFX5	MA0510.2	chr1:109584418-109584434	GGTGACCATGGCAACC	-	6.33

Enhancer Sequence

TATTTTTCTC CCCAATAAAG GGAAGCGGTT TAACCCTTTG AGTTCCACAA CCTTGCGTTC 60
TTCTACGCAG GCGCCCCTCC AGCGCAATCC CAGTTCTAAA TCGAGTCGCT GCCCCTTTCC 120
GCGACCACAC CCAGATCCCC AAAGGCCTGC TCCCATCCCG ACCATTGATG TGAGAAAGGC 180
CAAAACCGGC CCCAGCGGGG CTCCCAGCCC CGCCGCTCCC TCTCTTCCTC CGGGCCAAGG 240
CGTGCCCAGA AAGGGACGCG AGCGCGCCCC TCAGTTCTCG CACGGGCTCG ACCAAGGGGC 300
GAGGAAGGAA GAATCGGCGC AGCGGCGAGA TGGGCACGAA CCTCGCGCTC ACTTGCTGCT 360
CAGTGCCAGG GCGAGGGGCG TCGCTCTGCC CCCAGAATCC AACTGGTAAT GTGGGAAAGG 420
TGTGGTCCAG GACCGGTGAC CTCGAACCGG GGCCCAGCAG TTCGCAGATC CTCACCCCGC 480
GATGCTGGGG CCTCACCCAC GACCCCAGCC CCCTCCCAGT CGGCACCCAA GCCCACTAAA 540
GACCCCTCTC CGGGGCCGCA AACACAGTCC TCGGGGCCGC CCGGTCGGAG CCGTGTCAGG 600
TGGTGACAGG AGGCGACGGG TGACCATGGC AACCCGAGGT GTGCAGCGGA CCGACCCAGC 660
CTCCGACTCC CGGAGTCACC 680