EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS094-01698

Organism

Homo sapiens

Tissue/cell

hMADS-3

Coordinate

chr1:90274340-90276550

Target genes

Number: 6
Name	Ensembl ID

LRRC8B	ENSG00000197147
RP5	ENSG00000231999
LRRC8C	ENSG00000171488
LRRC8D	ENSG00000171492
ZNF326	ENSG00000162664
GEMIN8P4	ENSG00000228175

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF4	MA0039.3	chr1:90275297-90275308	GCAGGGTGTGG	-	6.62
Nr2f6(var.2)	MA0728.1	chr1:90276489-90276504	GAGGTTAAAAAGTCA	+	6.26
POU6F1	MA0628.1	chr1:90276377-90276387	ATTAATTAAT	+	6.02
POU6F1	MA0628.1	chr1:90276377-90276387	ATTAATTAAT	-	6.02
RARA	MA0729.1	chr1:90275741-90275759	ACATGACCATTTGCCCTC	-	6.36

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I089807

chr1

90273233

90274669

Enhancer Sequence

GTCCACAAGC AACACCCCCG CAGCTGGCAT CTAAACCCTT GGTAAAGCTC TTGGCTACAG 60
AGTGCTCGTT GATGACATTT CATCTCCAAG GCTCTCCTTG ACTTTCCTTT CACTGATACA 120
AGGTAATGCA GCTTGAAGCC TCCTACTTTA GCTTGCAGCA CAGGGGGTCA TTAGTGAGGG 180
GTAATGCTGT ATTCACATGC TGGTTACCTG TTTGTCTTGT CTTCTCTTTT CTGACAACAC 240
ACAGCAGGCA AGGCCTTATC ATCCTTTGAT GAGTAAGGAC AGCTATCTTC TTCAAAGGGC 300
TGGAGTCTCA AAATGAGATG GTCCTTTAGA TTTTTCAGTC CCAACTCTTT CATGAAATTG 360
TACCAAGATC CTGATTTCCT AAGCAGACAT GGGTCAGGAA CTTCATTATT GCCCTTTAAT 420
AGATTATATG TTAGTAGGTG CTTGATAAAA TCCATATTGA ACAGGACCTG AATGTGAGTC 480
CATCCTTGGA GCCACTGCTC TGCCCCTGAA ACTTTCTCTG TCCTAGCCCT TCAGCTTTCC 540
CTTCCTGCTG GAGTTCTGCC ACTCCTGCAG GGCTATGAAA TTCAATTGTG AAAACATCTC 600
TCCAGACCTC TTCATCAGTT CTTCCTAACA ACTCTAAGCC TCTAATACTT GTGCTTAGAC 660
TATTTTTAAC TTTTCCTTTC TTTTAAAAAA TTACACCAGA GGAGCTTAAT GAGCCCTACT 720
TAACTTTTCG TAGAAAAAGA AAATTTGCAG ACATTAACCA ATAAGTGCGA CTGAACACCA 780
TGGTTAGCTG GCACGCCTCT GAAAACCTGC CTTCTCCCTG TGCAATACAA TAGTTTATTT 840
TTGGACAGCA GCCTCCACAC AACATCATGA ACACACAACA CTGGGGTTTA TAATGAACTT 900
AAAAGAAAGT GAAGATTTAT GTGAGAGGTT TAGAGGAGGA ACTCAGGGTT GCAGAGGGCA 960
GGGTGTGGGA AGGAGGGACG AGTTCCTGGG CAATGAGAAG TCCTGGCTGC CCAAAGCTGC 1020
TTCCAGCATG TTGCACCTCC AGATTCTTTA TCTTTGCTTT GAATCAGCCA GGAGTATGAA 1080
TGATATGAAG CAAGTGGGAG AAAATAAGCA AGATTTCAGA TTTTTGTTCA TTATCATGTA 1140
AAACTAACAC ACACATAGAC ACGCATACAC CACCACCACC ACCACCACGA AAACCAGCAA 1200
CTAGCCAAAC AAAAAAGAGC TTGAGCTCTT ACAAAGAATA AAGCACTGTG GCAATAAACA 1260
TTTTCATCAT TCCTCCATCC AAACTCAAGA GTCCCTTTGG GTCAAAGTTG ATTCTAAGGA 1320
AAGGTTCTCA GCTGTCCTGC AAGGCAAGAG GTCCAAGTCA CAAATTACAG GACTGCCCCC 1380
ATTCGTGTCA TAGCAGTTAG GACATGACCA TTTGCCCTCT GGATTTTAGC TGAAGTATCA 1440
TGGAGGTCTT TCCAGGCATG AAAGTAAAGC CCTATTCTTA ATAGTGCTCG TACCCAACCA 1500
TGCTATTTGT TCCAAAGTCG CCTGATTACT TTCCCTATTA TCACCATGAC CTTCTAAATT 1560
GGGGCTCAGC CATGCCTTTA CCTAATGGGG TTACAATAAA CCATCTCTGA CCTGGGGTTT 1620
GTGAACGCAG TGTGAGGCAT GCAAACACAG CCTTATTTAA GTGCTACTGG TGTGTCTAAG 1680
GTCTGGGGAC CAGAGAGGGA GGAAGTTAGA CTTCAGCAGT GCAAGACCTT CCTCTCTTGA 1740
TAATTAGCCC ATTCTCTCTG AACAGTGTTA GTGTTATAAT GTACCATTCT TTAGAATTTT 1800
TCTTTAGAAT CCATATTATT TCAAGCATTC CATGATAACT CAGAAGATAA AAGTGCTTGC 1860
TCAAAGCAGG ACAAAGTACT GTCTGGCTGT GTTGGCTAAA AGAAAAGATT TTTAAGATGC 1920
TAAGAAATAA AGGAGAAATT TGTACATGAC AGGAATAATT TTTAAGTTTA TTACCATAAC 1980
AAATTACTTG TGATCAAAAT GAGTGTGAAG TATTTATTCT TGATGTATAC AACTTTGATT 2040
AATTAATCAA AAGGAGACAG GATAAGAAGA GCAATTCTTT TGAGTTGCCA CTCAAGTCTA 2100
GTGCTCATAA TGAAAAAGGC AAAGAGTTTC ATGTTTAGAC TCTTGATGAG AGGTTAAAAA 2160
GTCAACAAAC CTCCATCAAA AAAAGCAATT TTCTGAGTTC TTTACTTGCA 2210