EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS094-01649

Organism

Homo sapiens

Tissue/cell

hMADS-3

Coordinate

chr1:87691430-87692930

Target genes

Number: 2
Name	Ensembl ID

SH3GLB1	ENSG00000097033
RP4	ENSG00000230721

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ETV6	MA0645.1	chr1:87692082-87692092	AGCGGAAGTG	+	6.02
RREB1	MA0073.1	chr1:87691633-87691653	TGTGTGTGTGTGTGTGGTGG	-	6.41
SPI1	MA0080.4	chr1:87692078-87692092	AGAAAGCGGAAGTG	+	6.77
SPIB	MA0081.2	chr1:87692080-87692092	AAAGCGGAAGTG	+	6.92
ZNF263	MA0528.1	chr1:87691979-87692000	GGAGCAGGAAGATCAGGAAGG	+	6.76

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I087223

chr1

87689317

87693043

Enhancer Sequence

ATGCAGATGC AGATGTGACA CAAGCAAGAC AAATGGTCTC TGCTCTCAAG GGGCTTACAT 60
TCTATGGGTG AAACACAGGT ACAGATAGGC AAAGGATTGT AGCAATAATT GTAGAGTGAG 120
ATTGTTATTA AAAATAAAAG TAAATAATAG AATACAGGGA TACAGTGGTT TGTGGTGTGT 180
GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGTGG TGGTGGTGGT GAAGGAAGGG 240
CTCCCAGAGG AGATGACTGC TGAGTGGAGA CCTGAGGCAA GAGGGAACCA GACATATGCA 300
AATTGGCACT GCAGGCCCAG GGTGCAGCTG ATGCAAAGGC CCCAGAGCTA CGCTGGCTTG 360
GCTTTGAGGA GCAGAAGGGA GGTAGGAACA CAGTGAGCAT GAGGAGAGTG TTCAGAGATG 420
ACCCTGGCCC TGGTAAGGAA TTAGGTTTAT TCCAAGGGCA ATGAAAACCT TAGGGAGAAA 480
TGCTGCATTT TCAAAGAGCA CTACGGCTGC TTTGTGGAAA AGGAGCTGTA GGTGGGGTGG 540
GCAAGTTTGG GAGCAGGAAG ATCAGGAAGG GGCTTTTGTG GTAATCTGTT GAACTGACTG 600
GATTATTTCC AGAAAGAAAC TGGGGCTTTC CTTGCTGAGG CTGGTAGTAG AAAGCGGAAG 660
TGGAGTAGCA GATCAGGGTT CACAGCGTGT GGCTGAGAGC CAGGGTGACA TTCCTCTGGA 720
CATTCTTCTG GACTGAATCC TTGCATCATC TACATTTAAA ATGAACCTCA GAAGCCCTGG 780
CCCTGTGATG CTGATGCTAT TGAGGTTGAA TTCTCAGGGA GTGAAGAAAG GGCTTGGCTG 840
AGAACAGAGA GGGAGGAGTC CCACATCAAG GGATGACTTC ACTAAGGAGG GAAACTGGAG 900
AGAGGTGGGC ATTTCCAGGC AGAACAACAG CGTGGCGGAG AGTGAGGGAG CTGACGGCAG 960
GAGTGATAGC TGGTTTAATA GAGGGTGCGT TGCGGCGCTA TCAGCAGTGT GGAGTGGGAT 1020
GGCGAGGCTG CATGCTGGAA CTTATTTAAA GAGGCTATTG TAAAAGTCTC TGAGCCAGTT 1080
AATTACCAGT TTTTGTTATG TCAGGAACTC CTTGAGTTAA AGCAGAAAGA AACCATTCAC 1140
AAGTATGTTC CAGTTCTGTA GTTTAATGGG ACATATAAAA AAAAATAAAA AACTGATATA 1200
ATGATTTAGT TCATGGAAGG ATTGAAAACC ATCACAAGAA AAGCTGAAAT TACATATTGT 1260
GTTCCATCTC CTCCTACAGA AGCCATTGAA ATGGCTGCAG ACTTAATTGG ACTAATGACC 1320
CATTGCTGTT ATGCACAACA CTCTGTTATT CACAGAAAAT TGACAAAGCC GTGGAAACGG 1380
TCCACAAATA TGAACCCAGG TGAGCACAAA GACCCAGATG GGCTTTCTGA AGCACGTGTC 1440
CAAAGGTAAA AAGGAAAAAA AAGATGGAAG CAATGTGTAC ACACAGCTGG GAAGCCTTCT 1500