EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS094-01170

Organism

Homo sapiens

Tissue/cell

hMADS-3

Coordinate

chr1:59840680-59842250

Target genes

Number: 5
Name	Ensembl ID

JUN	ENSG00000177606
PHBP3	ENSG00000228121
RP4	ENSG00000230812
RP11	ENSG00000235215
FGGY	ENSG00000172456

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1	MA0050.2	chr1:59840944-59840965	AAAAAAAAAAAGAAACAAACA	-	6
KLF4	MA0039.3	chr1:59840785-59840796	GCAGGGTGTGG	-	6.62

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I059374

chr1

59840561

59842406

Enhancer Sequence

TACACAGGTA ACTAACCTGC ACATTGTGCA CATGTACCCT AAAACTTAAA GTATAATAAT 60
AATAAAAAAA AATCCACCTA GTTTTCATCA AAAAAAAAAA AAATGGCAGG GTGTGGTGGC 120
ATGCACCTGT GTTCCCAGCT ACTCGGGAGG CTGAGGCAGG AGAATCTCTT GAACCCGGGG 180
TGCAGAGGTT GCAGTGAGCT GAGATCGCAC CACTACACTC CAGCCTGGCG ATAGAGTGAG 240
ACTCCATCTC AAAAAAGAAA AAAAAAAAAA AAAAAGAAAC AAACAAAAAA AAACTGCATG 300
GGATCCTCAC AGATGCCTGC TGGCATCTCA AGGTAAGGGA TCAGGCTTCT GGAGACATTT 360
CCTCTCATTC AGTCCTTATT CCTCTTTGCT GGCCTATCTC CAGACTTTTC TTTTGTAGAG 420
AAAGCAGGGA ATATTGCTAT CTTCCCTTCT GAGACCATGT GCATACTTAA GAGTACCTCA 480
GACTTCCCAC AACATGTTAT TTCTAGTTGC TCATCCCACA AATATTTGTT GAATTACTAG 540
ACAAACTGCT CAGCTTCATC TTCCAGTTCC TGTTATGTGA GGAGTACTTC AGAGGTTATA 600
GAGGGCTTCC ACATGTGTTA TCTCCTTAGA GAGGAGAGGT TGGACTGGGA TCTCCAGCTT 660
TGATTGGTGA CGGTTAGTGT GGTCTCAAAA AGAAAGAACG CAGGGACTCC TTGCTCCTCC 720
TATTCCCAGT GTCTCTTTTT GGCAAAAGGC TTGAGTTCTT TGTGACATTC TACTTGGGTT 780
CTGTTGTCCC ACAGTGGCTG GCTGTGTGGC TACAGGCTAA AAGCTGTCGT TATATAATGT 840
CTTTAATGAC CACACACAAG ATCTAAAGTA GTTTTTTTTT TTTTTTTTTT TTGCCTGAAT 900
TTAAGAAGAT TGTTGTGCTT TGGCTTGAAG CACTGGTTGT TGCTGCGGTG GTTTGGCGGT 960
TCATATCTGG TCACTGGCCT TTGATTTCTG GAACCTTTAG AAAGAGGCTG CCTTTTCTCC 1020
TCTCCCTGAC CACTGATTGC TGAAACCACA AGACATATGG AAATAGATTT CAGGGACTAG 1080
CCAAAAGCCA TTCTGGTAGT TTGATTCACA TCGTCTCAAA GGCTACCATT TTCTGACTGT 1140
GGCTTGTTAG ATCCTATACA GAGATACTAC TAGTTCTTAG CTGTGTTAGG AATATTTAGT 1200
ATCTTTAAGT TTTGCTTGAT TTAACATTAA CATCTTAGAA TGGGCGTTCA AAGAGAAGTT 1260
TAGGGCAGGT CCCTTTCTAG ACACAAGCTT TCACCTAGAT GTTTAGGAAG TTAAAACAAC 1320
AACAGTAACA GAGAATCAGC TTGATACTTT GCCTTTTAGA TCTGAACTCT TTTGATATTG 1380
TTTTGATAGG GCCAGCACTT GGGATAGTAC CGTTTATCTG CTGTAAATAG ATGTTGGTGT 1440
TTATATAGTA GTGTTAGGGA AGCACTATGT AGGAGGAACT CACAGAATTC TGATAAAGGC 1500
CAGTTGTATA TAAAATAGAT ATAATAATAC CCAGGACTTT TGTGTTGCTC TAAGGAGATA 1560
ACACATGTGG 1570