EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS094-00869

Organism

Homo sapiens

Tissue/cell

hMADS-3

Coordinate

chr1:43824680-43824830

Target genes

Number: 19
Name	Ensembl ID

LEPRE1	ENSG00000117385
ATP6V1E1P1	ENSG00000225099
FAM183A	ENSG00000186973
WDR65	ENSG00000243710
RN5S46	ENSG00000199240
C1orf210	ENSG00000253313
TIE1	ENSG00000066056
MPL	ENSG00000117400
RP1	ENSG00000234694
CDC20	ENSG00000117399
ELOVL1	ENSG00000066322
MED8	ENSG00000159479
SZT2	ENSG00000198198
PTPRF	ENSG00000142949
KDM4A	ENSG00000066135
ST3GAL3	ENSG00000126091
RP11	ENSG00000236200
ATP6V0B	ENSG00000117410
B4GALT2	ENSG00000117411

dbSUPER

Number of super-enhancer constituents: 8
ID	Coordinate	Tissue/cell

SE_23264	chr1:43823493-43827031	Colon_Crypt_1
SE_23848	chr1:43824527-43825694	Colon_Crypt_2
SE_24762	chr1:43823482-43826203	Colon_Crypt_3
SE_31866	chr1:43823486-43825843	Gastric
SE_34471	chr1:43823189-43827267	HCT-116
SE_35010	chr1:43823254-43827460	HeLa
SE_57439	chr1:43824582-43825132	VACO_503
SE_65856	chr1:43823890-43825317	Pancreatic_islets

Enhancer Sequence

AGAGGTGGTG GGGCTGAGCC GAGGTGGGGC CGTGGCCAGG GGGAGGGGGT GCTAGGCCGG 60
AAGGGGCTGC AGCCGAGGGT GGCCCTGATT TTGTGGCCGG CCAGGAGCGA AGGGGTCCCT 120
TTCTGTCCCC TGAGCACCGT CGCCTCCTTT 150