EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species
EnhancerAtlas 2.0
TagContent
EnhancerAtlas ID
HS094-00804 
Organism
Homo sapiens 
Tissue/cell
hMADS-3 
Coordinate
chr1:40851040-40852400 
Target genes
SNPs
Number: 1             
IDChromosomePositionGenome Version
rs1391315chr140852382hg19
TF binding sites/motifs
Number: 8             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
NR3C1MA0113.3chr1:40851491-40851508CAGTACATTTTGTTCTT-6.13
NR3C2MA0727.1chr1:40851491-40851508CAGTACATTTTGTTCTT-6.23
RFX2MA0600.2chr1:40852307-40852323TGTTGCCATAGGAACA-6.04
RFX2MA0600.2chr1:40852307-40852323TGTTGCCATAGGAACA+6.13
RFX5MA0510.2chr1:40852307-40852323TGTTGCCATAGGAACA+6.28
RFX5MA0510.2chr1:40852307-40852323TGTTGCCATAGGAACA-6.37
SPI1MA0080.4chr1:40851509-40851523AACTTCCTCTTTTC-7.14
SPICMA0687.1chr1:40851509-40851523AACTTCCTCTTTTC-6.31
Number of super-enhancer constituents: 37             
IDCoordinateTissue/cell
SE_03134chr1:40851099-40851484Bladder
SE_03134chr1:40851511-40852921Bladder
SE_03839chr1:40850611-40852546Brain_Angular_Gyrus
SE_04329chr1:40846335-40853554Brain_Anterior_Caudate
SE_08414chr1:40846289-40853002Brain_Inferior_Temporal_Lobe
SE_09232chr1:40844996-40853879CD14
SE_10167chr1:40845196-40853865CD19_Primary
SE_10889chr1:40837614-40877708CD20
SE_11872chr1:40845246-40853694CD3
SE_13110chr1:40848382-40853729CD34_Primary_RO01480
SE_13584chr1:40844944-40853555CD34_Primary_RO01536
SE_14445chr1:40838829-40853557CD4_Memory_Primary_7pool
SE_15530chr1:40846294-40853798CD4_Memory_Primary_8pool
SE_15973chr1:40845677-40853867CD4_Naive_Primary_7pool
SE_16635chr1:40849445-40853784CD4_Naive_Primary_8pool
SE_16957chr1:40846343-40853705CD4p_CD225int_CD127p_Tmem
SE_17325chr1:40838557-40873402CD4p_CD25-_CD45RAp_Naive
SE_17842chr1:40844625-40864199CD4p_CD25-_CD45ROp_Memory
SE_18386chr1:40838397-40853796CD4p_CD25-_Il17-_PMAstim_Th
SE_19424chr1:40846153-40853702CD4p_CD25-_Il17p_PMAstim_Th17
SE_20011chr1:40846373-40853881CD56
SE_20796chr1:40844923-40853882CD8_Memory_7pool
SE_21559chr1:40846275-40853745CD8_Naive_7pool
SE_21987chr1:40846094-40863432CD8_Naive_8pool
SE_22383chr1:40844968-40853881CD8_primiary
SE_26232chr1:40845639-40853557Duodenum_Smooth_Muscle
SE_31081chr1:40846370-40853673Fetal_Thymus
SE_32537chr1:40844774-40853751GM12878
SE_40132chr1:40846146-40852943K562
SE_43804chr1:40845348-40853547MM1S
SE_50468chr1:40846794-40853665Sigmoid_Colon
SE_53092chr1:40846833-40853666Small_Intestine
SE_53508chr1:40846820-40854583Spleen
SE_55131chr1:40846406-40853729Thymus
SE_58445chr1:40828930-40871082Ly1
SE_59998chr1:40841808-40870673Ly4
SE_62202chr1:40838568-40871500Tonsil
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 1             
ChromosomeStartEnd
chr14085143140851768
Enhancer Sequence
TACAGTTTAT TTAAGTTCTG GATTTCATAA GCTTACTTGG AAAATACTTT TTTAAAAAAA 60
ACATTTCAGG TCAAAGCTTC CAAAAAGAAA TTTCTTAATC TGAAACAATG AGAACTGGGT 120
TCCTCAGGCC TCATGTCATT TCCCCTCACC CACAAATCAA ATGTGTAATG CTCTCATTTT 180
ATGATGTATT GAAACAGTGA AGCAAATGCG AGAGGGAGAG AGACCTACTC TCAGCTGTAG 240
CTGATAAGTG TGTCCTAGCA TGGTGATTTG AGCAAATAGA GCACCTTTTC TTTTCCTTTT 300
CTTCAAATAG CCATGCTGTC TTTTGCAGCA GTTGCTGGTG ACGGAATACC ATAAATCCCC 360
AGGCCTCTAC CACAGAGCTT ACATCTTTAG ATGTGGGTTT ACATGTTAAT CCTACAATGT 420
TATTTCACCT CAGTGGTCTG AAGTGCGCAC ACAGTACATT TTGTTCTTTA ACTTCCTCTT 480
TTCTTGTCTA ACTGGAAGTC CCCAAATGTG TGGATTTAGA AATGAGTTCT CTAGTGTTTC 540
TAGTTTTGAG TTAAGGAAGT TTTGTCTTGA TATTGTTTAG GTGGTTGTTT TTGTTCTGTG 600
CCTTCAAAAA TAATTTCTTA CAGAATTTTC TGTGTGAACT GGTGACATCA TATGCTGTAG 660
TGTAAAGCTT GTAGAGAAGG GGGCATTGGT GTCTTTTTGT TGTTGTTGAC ACTTTATCAC 720
TCCTTATAAC TGACACAAAC CCTGAGAAGA GAAACAGGAA GGAAACTCCC TGTTCTTACC 780
ATGATGCTTT TGTTCAAAAT AGCTGAAAAC AGCAGAGCTG ACGGAAACCA ATTTGAGTGT 840
GACAGCTGAT TTGAGAAAGA ATGAATTAAG AGATTCAGGC TCTTCTGCTA TGTTGAAATC 900
ATTTTTACTG AAAGATTAGC TGTTTGGAAC AGGGATTGAC TTTGTCTCTC TGAAAGTAGG 960
CATGAAGAGT TCGGTTAGAG GAACCGTTAC AGATGGAGGA GAAACTTGAG GAAAGGTCTT 1020
TCCTGTAGTG TGACTACAGT ATTAACATTC CCAGATTATA TGAAAGAGAA AGGAAGCTTC 1080
ATTAAATGAA ACATTGGAAT CAGGAAGACT CCGGCTTGGC TCCCTGAGCA TTCTAACTTG 1140
TTCTGAGCCT AGTCTCGACA GAAGTAGCCT GACACAAGTG GCTCAGATCA AGGGTCCATA 1200
TTACGGGCAG AGTAAAAATA GGTCCCAGTT TCATTAGACT TCTCATACAT TTAAGGAAAA 1260
AAAGATTTGT TGCCATAGGA ACAGACCAGT TGTTTTCTGT CTTGTGGGAT TTTAGGAGCT 1320
GGGGAGATAG GAGGATCCCT GTGCTTATAA TCTAAACATC 1360