EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS094-00778

Organism

Homo sapiens

Tissue/cell

hMADS-3

Coordinate

chr1:39592590-39594130

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nkx3-2

MA0122.3

chr1:39593105-39593118

TAATCCACTTAAT

dbSUPER

Number of super-enhancer constituents: 11
ID	Coordinate	Tissue/cell

SE_00416	chr1:39592440-39600925	Adipose_Nuclei
SE_25799	chr1:39592582-39593964	Duodenum_Smooth_Muscle
SE_32006	chr1:39592430-39593182	Gastric
SE_32006	chr1:39593653-39594239	Gastric
SE_35822	chr1:39592962-39599805	HMEC
SE_37973	chr1:39592061-39600914	HUVEC
SE_42256	chr1:39592570-39593521	Lung
SE_42256	chr1:39593630-39594454	Lung
SE_47164	chr1:39592912-39594231	Panc1
SE_54583	chr1:39592300-39593840	Stomach_Smooth_Muscle
SE_64261	chr1:39592395-39599573	NHEK

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I039126

chr1

39592310

39600784

Enhancer Sequence

TAACTAGAGT TAAAACTTTC CTTGTCCTGT TGGCCGGGTG CCTTGGCTCA AGCCTGTAAT 60
CCCAGCCCTT TGGGAGGGTG AGGCAGGTGG ATCACCTGAG GTTGGGAATT TGAGACCAAC 120
ATGGCGAAAC CCCGACTCTA CTAAAAATAA CAGAGTAGCT GGGCATGGTA GTACACGCCT 180
GTAATCCCAG CTACTTGGGA GGCTGAGGCA GGAGAATTGC TTGAGCCCAG GAGGCAGTGA 240
TTGCAGTGAG CTGAGATCAC GCCACTGCAC GCCAGCCTGA CAACAGAGCG AGAGACTCTA 300
TCTCAAAAAG AAAATAAAAG CTCTTCTTGT CCTGCTAATT CTGCATTTTG ATTTTTGGCA 360
GCATTTAGGA AAGAGCTGAG GTGGACCTGG TGTGTAGCGT TGGTGGGAGT TCCTTCGTTT 420
TCTGGGCTGA ATGATTTAAT AATAATATAA TAGTGGCTTT CATTAATTTC TTACTATGTG 480
CCAGGAATGG ACTGTGTTAA GCACTTTATA TACATTAATC CACTTAATTC TCATGATAAC 540
CCTGTGAAAT AGATTATCTC ATTTTGCAGA GGAGAAAAGT GGGTCTCAGC CAGTGAAATA 600
ACTTGCTCAA GTTCTCTCAC CCAGTAAATG GTAGAGCAGT CATTTATGTG TAGCTCTGTT 660
GGACTTCAGA ACTCCAGCTC TTAACTCAGT ATATACTTTT CCTTCACTTC CTTGAATAGA 720
ACTGTTTGGC TTGAGTCTCC TTTTCTCTAA AAACTCCTAG TTCTGGAATG GTGCCAACTT 780
AAGGGGTCAG GGAAGTGACC TTTACTTGTG TTCCTTTGAG CTGTTATTGT TTTCATTGGG 840
AAAGAGAATG TGAAGTCAGT TCACATTTCT TACCTACTGG TTGCAGTCTT GCCATGGGGC 900
CCTAGTCAGA TGTGAGATGT TGTAAGTTAC TTAAAAAAAA AAATGTCCTA GTGATTAAGA 960
GGAAAAAACA TAGGCCTGCT ATGTTTATGT AACTCTCTTT TGTATTATTA CAAAATTAAA 1020
CATGTTCACT GTAATACATT TAAGCAGAAA TTACAAAGAA AAAAGTAAAA ATTCTCTTTT 1080
CTAGTCTTTA TTTTCTCCAC CTAGGCCCAC TGGTCAGGGT AACCACTGTT CAAGCTTTGG 1140
TTTGTATCCT TACAGGTTTT TTCTTGCCAG GCTTGCTTTG GAACTGCACC TTTACATCCT 1200
TTATATTCCT TTAGGTTGGT TGTGTCTCTT CTTGACTCAT GAGCCTTACC TCTTATTTAT 1260
TTTTATTACC ATACATCTGG CTTACATTTT TATTTTTTAT TTTTTTTTTA GAGACAGGGT 1320
CTTGCTACAT TGCCCAGGCT AGTGTGCAGT GGCTGTTCAC AGGCACCATC ATAGCACAGT 1380
GCAGCCTCAA ACTCCTGGTC TTAAGCAGTG CCCCCTGAGT AGCTGAGACT ACAGGACTGC 1440
ACCACTGCAC TGGGCTGCCT TACTTTTGAG TCTCCCTTTG ATACTTAAGA GTTCTGCCAT 1500
AGGGCCAGGC ACGGTGGCTC ACGCCTGTAA TCCCAGTACT 1540