EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS094-00540

Organism

Homo sapiens

Tissue/cell

hMADS-3

Coordinate

chr1:27948170-27949550

Target genes

Number: 17
Name	Ensembl ID

RP11	ENSG00000172746
TRNP1	ENSG00000253368
SNRPEP7	ENSG00000225990
WDTC1	ENSG00000142784
U6	ENSG00000206888
MAP3K6	ENSG00000142733
WASF2	ENSG00000158195
AHDC1	ENSG00000126705
FGR	ENSG00000000938
RP1	ENSG00000235912
IFI6	ENSG00000126709
RP3	ENSG00000231344
PPP1R8	ENSG00000117751
SCARNA1	ENSG00000252947
C1orf38	ENSG00000130775
RPA2	ENSG00000117748
XKR8	ENSG00000158156

dbSUPER

Number of super-enhancer constituents: 11
ID	Coordinate	Tissue/cell

SE_09188	chr1:27935305-27948984	CD14
SE_09188	chr1:27949083-27965280	CD14
SE_11718	chr1:27949316-27954182	CD20
SE_20210	chr1:27947866-27949072	CD56
SE_20210	chr1:27949159-27954255	CD56
SE_25377	chr1:27947526-27948963	DND41
SE_25377	chr1:27949159-27962785	DND41
SE_39434	chr1:27949314-27950800	Jurkat
SE_42462	chr1:27949373-27950745	Lung
SE_62470	chr1:27916580-27996594	Tonsil
SE_66376	chr1:27949314-27950800	Jurkat

Enhancer Sequence

GTAGGCACAG AACAGGGCAT GGTCAGCAGC ACCTCCAGCC CCCAAGGCAC CCTGAGGCCA 60
GGTGGAGCCA CACAGGTCTG CAGAGATGAA TCCTGCCAAA CCCTCATCTT GGACACCCCC 120
CACCACTGGG GCTTTTGTCC GCTCTGCCCC AGCCACTGCA GCTTCCCTGG GAGGGCTTGT 180
CCCTGCAGAA GGAATAAGCT CGGGGGCACT TAGGGCTCTT AGCTTCTTCC TTGGGCTCCC 240
CAGCTGGGTT GGGCTGGGGA TTGGGAATTC AGAGGACAGC TGACTAGGTC ACTTCCCCAC 300
AGAAAATGGC TACTGATTTC CTTCTGGATA AAATCTAGAC TTCTCAATGT GGCTTAAAAA 360
GCCTGACAGA GACCAGGTGT GGTGGCTCAT GCCTGTAATT CCAGCAGTTT GGGAGGCCCA 420
GGCAGGCAGA TCTCCTGAGG TCAGGAGTTC GAGACCATCC TGGCCAACAT GGTGAAACCC 480
TATCTTTACT GAAAATACAA AAAATTAGCC AGGCTTGGTG GCTCTTGCCT GTAGTCCCAG 540
GATCACTGGA ACCCAGGAGG CGGGGGTTAC AGTGAGCCAA GATTGCACCA CTGCACTCCA 600
GCCCGGGAGA CAGAGCGAGA CTCCAACTCA AAAAAAAAAA AAAAAAAAAG CCTGGCAGAA 660
TCTGCCTCTG CCTACCTCTC TAGCCTCTGT TCTCTCCCAT TCTGCATCCC ATATTTTATG 720
AACCACCTAA GGTGAACCAC TTTGTGGTTT CCAGAAGTCA TCATTTATTC TCATTCTCTC 780
TCACTCTCTT CCTCTTTTCT TACCTCTTCC TTCACTGTCT ATTCATTTTT ATTTTTTATT 840
TTTTAATTAT TTATTTATTT TTTTGAAATG GAGTCTCCCT CTGTTGCCTA GGCTGGAGTG 900
CAGTGGTGCA ATCTCAGCTC ACTGCAACCT CTGCCTCCCG GGTTCAAGTG ATTCTTCTGC 960
CTCAGCCTCT CAAGTAGCTG GGATTACAGG CATGCGCCAC CATGCCCTGC TAATTTTTGT 1020
ATTTTTAATA GAGACAGGGT TTCACCATGT TGGCCAGGCT GGTCTCGAAC TCCTGACCTC 1080
AGGTGATCCA CCCGCCTTGG CCTCCCAAAG TGCTGGGATT ACAGGCATGA GCCACTGCAC 1140
CCGGCCGTCT ATTTCATTTT TATAGCCTCA GCTTAAAAAT CATCTCCTCC AGGCCGGGTG 1200
CAGTGGCCCA ACACCACCCC CCTCAACCAG CACACAGTTG CAGTCACCCA GGGTTTTTAT 1260
TGTTATGTAT ATGTGTTCCC AACTAGGCTG GAGCATTCTG AGGCTAGGGA CCAGGTGGGA 1320
TTCCTGTCTG TGTCCTGCTC CCAGCCCAGG CAATGTTCTG ACTAGGTGGC CTGGTCACTT 1380