EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS094-00499

Organism

Homo sapiens

Tissue/cell

hMADS-3

Coordinate

chr1:26629660-26631060

Target genes

Number: 18
Name	Ensembl ID

SNRPFP2	ENSG00000229786
RP1	ENSG00000223624
STMN1	ENSG00000117632
U6	ENSG00000207237
PAFAH2	ENSG00000158006
SCARNA18	ENSG00000252691
ZNF593	ENSG00000142684
RP11	ENSG00000236782
CNKSR1	ENSG00000142675
CEP85	ENSG00000130695
SH3BGRL3	ENSG00000142669
CD52	ENSG00000169442
UBXN11	ENSG00000158062
RP3	ENSG00000223583
HMGN2	ENSG00000198830
RPS6KA1	ENSG00000117676
AL627313.1	ENSG00000243905
RP4	ENSG00000235069

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOS	MA0476.1	chr1:26629683-26629694	AATGAGTCAGA	-	6.32
Nr2f6(var.2)	MA0728.1	chr1:26631027-26631042	AAGGTCAGGAGTTCA	+	6.04
ZNF263	MA0528.1	chr1:26630396-26630417	CCTTTCCTTTCCTCTTCCTTC	-	6.55

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I026302

chr1

26628893

26630326

Enhancer Sequence

GTGAGGGTGG GATGGGATGC AGAAATGAGT CAGAAGCCTG GAACTTTCCC AAACTTAGAG 60
CCTGAAAATG CTACTACCCA GGAGGCTGTC CGTCCATCAG CCAGCTGGGT GACACAAAGC 120
CCAAGTATCT CCTTCCCTCC CACCAGAAAC CAGGTGCCAC TCCCAACATC TCAGAGCCAG 180
AGAGGCCAAC CCACAGGCAG GATTCAATCA AGACACAGGC CGAGGTGGGT GGATCGCCTG 240
AGGTCAGTGG TTCGAGATCA GCTGTCCGAC ATGGTGAAAC CCTGTCTCTA CTAAAAACAC 300
AAAAATTAGC TGGGCGTGGT GGCGTGCTCC TGTAGTCCCA GCTACTTGGG AGTCTGAGGC 360
ACGAGAATCG CTTGAACCCA GGAGGTGGGG AGGATGCAAT GAGATGAGAC TGCACCATTG 420
CACTCCAACC AACCTGGGCA ACAAGAGCGA AACTCCATCT CAAAAAAAAA AAAAAAAAAA 480
AAGACACAGT CCATGTGACA CCAAGGTTAA GATGCCAGGT TTTGCCACTC ACTGGAGTAA 540
CCCACCCTCA GTTTCTTTTA GTATAAAATG GGGGTCGTAA TAGTACTGGC ACAGGCAGGG 600
TTCTGAGCAG ATTCAGAGAT AACAGAGAAG GTCTAGCCCA GCGCCAAGCT CAAAGGAAGC 660
ACTGAAAAAT GTGAGTTGGG GCTGCTGTTG TTTTTGCTGT TGCTGCCACA TAGGAAGCAC 720
TCGTAAATGT TAGTTTCCTT TCCTTTCCTC TTCCTTCTGG AAAAAGGAGT GCACCTGAAG 780
GACATAATCG AAGGCTACTA CTCTATTCAG TAAATGACCT CAGGTGATCC GCCCCCCTCG 840
ACCTCCCAAA GTGCTGGGAT TACAGGCATG AGCCACTGCA CCCAGCCTGG ACCAAATTTT 900
TTAGGACAAA TCCAAGAAGT TCCACTTTGA AGATGTCTGG TTCTGGCCTC AACCCTACTT 960
CTGAAGTCAG TCAGCAAGGG AATCTATGCT GCCTGGAGGC AGCCTCCAAT GCCTTCACTG 1020
CAGAGTTTGA GAATCATGCC CTGCCCCTTC CTTGGAAGGA GCCCTCCTCA AGGATCAGGC 1080
CCAGAGTTTC TTCACCCCCA GCATCCAGCC TCCCAAATCT GTCCCCACCC TGCCCCAGCC 1140
CCTGCCCTGT CTGGGCAGCC TCACGGGTTG TATGGCCAAG GCTCCCTTCA TTAGTTCCCA 1200
TGTGCTACCA GAGAGATCTT AAAACATAAA GCAGGCCGGG AGCGGTGGCT CATGCCTATA 1260
ATCCCAGCAC TTCTCACCCA CAGAAAAAAA TTCAAAATTC TGGCCAGGCA CGGTGGCTTA 1320
CACCTATAAT CCCAACACTT TGGGAGGCCG AGGAGGGTGG ATCACCTAAG GTCAGGAGTT 1380
CAAGACCAGC CTGACCAACG 1400