Tag | Content |
---|
EnhancerAtlas ID | HS094-00445 |
Organism | Homo sapiens |
Tissue/cell | hMADS-3 |
Coordinate | chr1:24337870-24339540 |
Target genes | Number: 14 | Name | Ensembl ID |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
IRF1 | MA0050.2 | chr1:24338820-24338841 | TTCTTCTTTCTTTTTTTTTTT | + | 6.26 | Nr2f6(var.2) | MA0728.1 | chr1:24339484-24339499 | TGAACTTCTGACCTC | - | 6.38 | RARA | MA0729.1 | chr1:24339481-24339499 | TCTTGAACTTCTGACCTC | - | 6.88 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I024011 | chr1 | 24337999 | 24339230 |
|
Enhancer Sequence | CAATTCTCCT GCCTCAGCCT CCCAAGTAGC TGGGATCACA CACCACCATG CCCGGCTAAT 60 TTTTTGTATT TTCAGTAGAC ACGGGGTTTC ACCATGTTGG CCAAGCTGGT CTTGAACCCC 120 TGATCTCAAG TGATCTGCCT GCCTTAGCCT CCCAAAATGC TGGGATTACA AGCATGAGCC 180 ATCACGTCCA GCCGATAATA ATTACATTTC AAAGGGTGGC AGCATTAAAC CCATCTATCA 240 TCTTGAATTG TCTCAAGACA AAGACTTTTA AATTATGTGA GAAGAGGACT GGTAGAATAC 300 AGAGGTAAAA GTAAGGTCTT CAGACTTAAA AGCTCTATCT AAATAAGATC TTTTGATGTG 360 GGTCATTCAT GAAACTAAAG CAAACAGATG AAGCCTACTA AGATCTTGAA GGTTTGGATT 420 GTCAAAGAGC CTGCCCCATT CAGCCGTGTC ATTCAGCACA GCCCGTGACT GTTCGGCCCC 480 AAGGCAGTTG ATGGTGCCTG ATCTACATGG GCAGGAGAGG TCTGCTAAAG CTCTTCAGCC 540 TCTAGGAATG GCCTTCCCCA CAGTGCCCTC CCCAGATGCA GCCATGGGGA ATAGCAAGCA 600 AGGAGAATCC TTCCAGAGAA CAAAACTAAG GGCTGTAGAT TGACCAGCCA AGGAACTCTA 660 CTGCAGGGAT AGCGAGTCCC CACTACTCCT GCCCTGCAGG ACTGTACAAG TGCGATGGAC 720 CAGAGACAGC TGAGTGTTTG CCATGTTCTT TTTTTCCCAA AGGGAGTTTT TATTGCACTT 780 ATCCTGTTGG GGAGAGATAA ATTGTCTTTA AGCTTACAGA TCTCTAGTCA TGAGAAGCCA 840 CATCCTGACC CTAATCCTCT AGAGATCCTG GACTTTGAGC TGGATTTAGT AACTGGATGT 900 AACTTTATTG CTGTATCCCT TGGGGAGGGC CAAATGCATT TCCTTTTTCT TTCTTCTTTC 960 TTTTTTTTTT TTTTTTTGAG ACGGAGTCTT GCTCTGTCTC CCAGGATGGA GTGCAGTGGT 1020 GCGATCTCAG GTCACTACAA CCTCCACCTC CCGGTTCAAG TGATTCTCCT GCCTCAGCCT 1080 CCTGAGTAGC TGAGATTACA GGCATGCGGC ACCATGCCTG GCTAATTTTT GTATTTTTAG 1140 TAGAAACGGG GTTTCACCAC GTTGGCCAGG CTGGTCTTGA GCTCCTGACC TCCAGTGATC 1200 CACCCACCTC GGCCTTCCAA AGTGCTGGGA TTACAGGTGT GAGCCACTGT GCCTGGCCTC 1260 CAAATGCATT TTCTTCATGG GAAGACGATG TGTTTGAATG TTGCCAGTCA AAGGGAGGAC 1320 CATGACAGCA ACTGCTTATT TCCTATCTCA AATCTACTCT CTCTCTGTTT CTTTTTTTTT 1380 TTTTTTTTTT CTGAGACAGA GTCATGCTCT GTTGCCCAGG TTGGAGTGCA ATGGCACGAT 1440 CTCGGCTCCC TGCAATCTCT GCCTTTATTT CTTTTTAATA GAGAGCCCTG GAGGCCGGGT 1500 GCGGTGGCTC ACACCTCCCT GAGTAGCTGG GACTACAGGT GTCTGCCACC ATGCCTGGCT 1560 AATTTTTATA TTTTTAGTAG AGATGGGCTT TTGCCATGTT GGCCAGGCTG GTCTTGAACT 1620 TCTGACCTCA GGTGATCCGT CCGCCGCAGC CTCCCAAAGT ACTGGGATTA 1670
|