EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS094-00433

Organism

Homo sapiens

Tissue/cell

hMADS-3

Coordinate

chr1:23875210-23875560

Target genes

Number: 22
Name	Ensembl ID

KDM1A	ENSG00000004487
U6	ENSG00000206935
LUZP1	ENSG00000169641
RP5	ENSG00000215381
HNRNPR	ENSG00000125944
C1orf213	ENSG00000249087
ZNF436	ENSG00000125945
Y	ENSG00000201405
RP4	ENSG00000232482
TCEA3	ENSG00000204219
ID3	ENSG00000117318
MDS2	ENSG00000197880
RPL11	ENSG00000142676
AL031295.1	ENSG00000244609
TCEB3	ENSG00000011007
LYPLA2	ENSG00000011009
GALE	ENSG00000117308
HMGCL	ENSG00000117305
FUCA1	ENSG00000179163
RP11	ENSG00000229106
PNRC2	ENSG00000189266
SRSF10	ENSG00000188529

dbSUPER

Number of super-enhancer constituents: 15
ID	Coordinate	Tissue/cell

SE_10300	chr1:23874995-23876158	CD19_Primary
SE_11050	chr1:23874719-23876639	CD20
SE_23281	chr1:23875001-23875556	Colon_Crypt_1
SE_23782	chr1:23875111-23875633	Colon_Crypt_2
SE_24936	chr1:23874969-23875667	Colon_Crypt_3
SE_31953	chr1:23874988-23875515	Gastric
SE_38016	chr1:23874093-23875784	HUVEC
SE_41075	chr1:23874912-23875903	Left_Ventricle
SE_42328	chr1:23874937-23875710	Lung
SE_48755	chr1:23874940-23875642	Right_Atrium
SE_50077	chr1:23874957-23875732	Sigmoid_Colon
SE_52549	chr1:23874953-23875690	Small_Intestine
SE_58372	chr1:23873313-23964782	Ly1
SE_68477	chr1:23874949-23904689	TC71
SE_68478	chr1:23874949-23904689	TC71

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I023548

chr1

23875092

23875990

Enhancer Sequence

CTCCCTTTCA CAAATGACAA AGCTGGGGCT CAGAGAGGTG AAGTTACATG GCCAGGGTTG 60
CACAGCAAAA GAGGGCATCG AGCCAGTGCT GGGACCCAGG CTCTGACACT TGGGCTAGGA 120
GCTGGAGCCA GGCCTTTCTC CCAAGTCAGG TTTACTAAGA GCTATGCTGC TGCTGTGAGC 180
CAATCACCCT TTCCTGCCTC ACTCCACGGA GCGCGATGAG TGGGCGGGAG AGGGGACAGG 240
CGGTTCTTCA GGGCAAGAGG ACTTGTTTCA GCCCATTTGG GAAGCAGCCC GGCGTAGCAT 300
GGCCTTCTCA AAGTGTGTGT GTCTGCATGC ATGTGTGCTC ATGCATGCAC 350