EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS094-00420

Organism

Homo sapiens

Tissue/cell

hMADS-3

Coordinate

chr1:23656890-23658680

Target genes

Number: 14
Name	Ensembl ID

RP5	ENSG00000215381
HNRNPR	ENSG00000125944
C1orf213	ENSG00000249087
ZNF436	ENSG00000125945
Y	ENSG00000201405
RP4	ENSG00000232482
TCEA3	ENSG00000204219
ASAP3	ENSG00000088280
E2F2	ENSG00000007968
ID3	ENSG00000117318
RPL11	ENSG00000142676
TCEB3	ENSG00000011007
PITHD1	ENSG00000057757
HMGCL	ENSG00000117305

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ZNF263	MA0528.1	chr1:23658629-23658650	GGGAGAGGGGAGAGGGGAGGA	+	6.23
ZNF263	MA0528.1	chr1:23658627-23658648	AGGGGAGAGGGGAGAGGGGAG	+	6.27
ZNF263	MA0528.1	chr1:23658644-23658665	GGAGGAGAAGAGAAGGAAGGA	+	6.77

Enhancer Sequence

GGTGGTGCAT GCTTGCAGTC CCAGCTACTT GGGAGGCTCA GGCAGGAGGA TCGCTTGAAC 60
CTGGGAGGCG GAGGTTGCAG TGAGCCGAGA TCGTGCCATT ACACTCCAGC CTGGGCGACA 120
GAGTGAGACT CCATCTCAAA AAAACAAAAA CAAAAACAGA ACTTGCTTCC CAAAGCAGCT 180
TAACAATACT AGCTGAAGAA TACAAAAATA CTACAACTAG AGTAGGTCTG AGAGCTCAGA 240
CACACTAAAA AATATATTTC AAAATTACTA CCTATCATCC TTGCATATTT CTCATCTCAG 300
AACAATACTT AGCAACAATG TCTGTTAATG AGTGCTCATC TAATGGGTTA ATTTACAGAT 360
TTTACCCAAA AATGAGATAT CATAGTCCTC TCATAATTTT AATACTGCAC AGTCTCAGGC 420
ACTGACTCTA ACTTCAACCT CCTCAATCAA GACCTAAAAA TGTTTAATGA TGACTGAAAG 480
AACATATAAA AGAACAAAAT CCAAACCTCA CAACATCAAA AATCACAATT AAAACCAATT 540
TATTATATCT ACTAGCAACA CATTAAAAAC CTACTTTTCC TGAGTTTTCA AAACTTTGTC 600
AACAAGTACT TGCACAATCT CATGAACTTT AACTTTATGA GAGAAATCTG AAACTTTCCA 660
TTAGGACTTT GCTGAAAGTG ATTGCTTGAC AGGAGTGGTT TTAGGCTAGT GATCACATAT 720
AGGGATTTTG CTGGAATCAT ATTTGCTGTA TACAACAACA TTTAACATAC AGAAGAATGC 780
ATCTTTCTCC TAAAGGAACA ATGCAATCTA AGAGAATGCG TATGTGTTTT ACAATTAACA 840
TATCAACTAT TTGTTTCGAA TTGGTTATCT CCGAGTTTAT TAGGCCAGAC ATGGTGACTC 900
ACGCCTGTAA TCCCAGCATT TTGGGAGACC AAAGTGGGAA GATCACTTCA GCCCATGAGT 960
TGGAGACCAG TTGGGCAACA CAGGGAGACT CCATCTCCAC AAAAAATTAA AAAAAAAAAA 1020
AAAAATAGCT GGGCTTCACT TTGGGAGGCC GAGGCAGGCA GATCACCTGA TGTCAGGAGT 1080
TCGAGACCAG CCTGACCAAC ATGGAGAAAC CCCTCCTCTA CTAAAAATAC CAAAACTACA 1140
AAATTAGCCA GGTGTGGCGG CGGATGCCTG TAATCCCAGC TACTGAGGCT GAGGTAGGAG 1200
AATCGCTTGA ACCCGGGAGG CAGAGGTTGC AGTGAGACGA AATTGCACCA TTACACTCCA 1260
GCCTGGGCAA CAAGAGCAAA ACACAAAATA GCTGGGTTTG GTGGCATGAG TCCATAGTCC 1320
CAGCTACTGG GGAGGCTGAG GCAGGAGGGC TGCTTGAGCC AGGAGGAGTC TGAGGCTGCA 1380
GTGTGCTATG ATCACACCAC TAAACTCCAG TCTGGGTGAC AGTGAGACTG TTTCTTTAAA 1440
AAAAAAAAAA AAAAAAAAAA AAAAAGGTCC CTGGTGTAAC AGGTTACTTT TCAGCACACA 1500
GTTTTCTCCA TTTGAAGGAT GAGCAGGAGT TCATGACCCG CCTGGCCAAC TTGGCGCAAC 1560
CCCGTCTCCA CTACAAATAG AAAAATTAGC CAGGCGTGGT GGCAGGCATC TGTAGTCCCA 1620
GCTACTCGGG AGGTTAAGGC AGGAGAATCG CTTGAACCTG CGAGGCAGAG GTTGCAGTGG 1680
GCTGAGATCC CACCACTGCA CTCCAGCCTG GGCGACAGAG CGAGACTGAA TGGAGAGAGG 1740
GGAGAGGGGA GAGGGGAGGA GAAGAGAAGG AAGGAATAGA ACAGGCTAGC 1790