EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS094-00373

Organism

Homo sapiens

Tissue/cell

hMADS-3

Coordinate

chr1:21659260-21659720

Target genes

Number: 13
Name	Ensembl ID

RP5	ENSG00000203394
HP1BP3	ENSG00000127483
U7	ENSG00000251914
MIR1256	ENSG00000221808
RP11	ENSG00000233072
EIF4G3	ENSG00000075151
RP3	ENSG00000236936
ECE1	ENSG00000117298
PPP1R11P1	ENSG00000236216
NBPF2P	ENSG00000227001
HS6ST1P1	ENSG00000187952
NBPF3	ENSG00000142794
ALPL	ENSG00000162551

dbSUPER

Number of super-enhancer constituents: 9
ID	Coordinate	Tissue/cell

SE_00105	chr1:21656775-21671990	Adipose_Nuclei
SE_00854	chr1:21659377-21660221	Adrenal_Gland
SE_01643	chr1:21659346-21660167	Aorta
SE_42174	chr1:21659237-21660059	Lung
SE_46660	chr1:21659232-21659834	Ovary
SE_47592	chr1:21659588-21659904	Pancreas
SE_48583	chr1:21659265-21660112	Right_Atrium
SE_50108	chr1:21658282-21660205	Sigmoid_Colon
SE_53334	chr1:21659249-21662815	Spleen

Enhancer Sequence

TCAGTCCAAG GTGACCCTGA GAGAAGTCAG TCAGGCGAGG AGTTAGAGGG AAGGGGGCTG 60
CGGGAACACA GGATGGGGGT GGGGTGGGCG GATGGTGAAG TAAGTTTCTA AGAACAGCTA 120
TGGAAAGAGA AACAATTGGG ACATGTGTCA ACACTGTTAC AATATTAGTG CCATCCAATT 180
CTTGGAGTCT AGCACCAGAT ATGCACCATG CATGCTCTGA GTGCTGCTCC TCTCACTGAA 240
TATTTGCAGT CTTCCTGGGA GGGACTTATC CTCACTTCAC AGATGGGAAA TCCAAGGCTC 300
AGAGAGGAAG ACACGCCTGC TAAAAGTCCT TGGTGACAAT TCAATGGCAG ATCCAGGGTT 360
CAAGCTCAAG TTGATCCCAT GGCCCTTGGT CTTAACCACT AGGTCACACT GAACAAACAG 420
GTATTGGTGG TGCGTGGTAG GGATCTGATG CAGAAGGTGG 460