EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS094-00074

Organism

Homo sapiens

Tissue/cell

hMADS-3

Coordinate

chr1:6802920-6804950

Target genes

Number: 7
Name	Ensembl ID

U6	ENSG00000253022
RP11	ENSG00000229519
NOL9	ENSG00000162408
ZBTB48	ENSG00000204859
PHF13	ENSG00000116273
KLHL21	ENSG00000162413
THAP3	ENSG00000041988

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Lhx3	MA0135.1	chr1:6804274-6804287	TGTTAATTAATTT	-	6.19
Nr2f6(var.2)	MA0728.1	chr1:6804514-6804529	TGAACTCCTGACCTC	-	6.22
TBX21	MA0690.1	chr1:6803921-6803931	AAGGTGTGAA	+	6.02
TBX2	MA0688.1	chr1:6803921-6803932	AAGGTGTGAAA	+	6.62
ZNF263	MA0528.1	chr1:6803612-6803633	TCCTCTTCTTCTGCCACCTCC	-	6.45

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I006743

chr1

6803061

6804630

Enhancer Sequence

CGAGTTCCAA AATTGAGGAA CTTGGGAGTC TGATGTTTCG AGGGCAGGAA GCATCCAGCA 60
CAGGAGAAAG ACGAAGGCTG GGAGGTAAGC CAGTCTCTCT TTCCACATTT TTCTGCCTGC 120
TTACTTTCTA GCCGAGCTGG CAGCTGATTA GATGGTGCCC ACCCAGATTA AGGGTGGGTC 180
TGCCTTTCCC AGCCCACTGA CTCAAACGTT AATCTCCTTT GGCAACACCC TCACGGACAC 240
ACCCAGGATC CATACTCTGT ATCCTTCAAT CAAGTTGACA CTCAGTCTCA ACCATCACAA 300
CACCTGATGC AAAGTCACAG GCCGTTGGCT TTCATGCCCA CCTGTATGGT AAGGCCAGGA 360
TTCAGAAAAT GTTCCTCAGT CCCCAAACCA GGACCTCACC ACACCCGAGT CACCACTGCC 420
AACCCCCAAC TCCCATCCCT ATTTGCCCTC TGTGCCTGGC GGGGGGTTGG GGGAGTTTGT 480
TTTGTTCCTC AAAATGTGGT CCATGGGCCA GCTGCGTCGG CATACCTGGG CACTTGTTGG 540
AAAGGCGGGA TCTCGGCCCC ACCCTAGATC AGCTTAATCA GAATCTGCAT TGTAACCAGA 600
GCCCCCTCAG TGAGTCACGT GCACAGTGGA GTTTAAGAAG CTCCTCCCTC CAGGACCCTG 660
CTCCACCTGG GCTGTCTTCT CACACCTATT TCTCCTCTTC TTCTGCCACC TCCGCAGGTG 720
TCTCGGCTTG GATTCCTGCA GCTCGGGAGG ACACATTAGG GAAATGTCTA TGATGCTCTT 780
TCTGCCTTAG CTTGTTAGAG TTGGCAGCAG AAGAGGCCCC TCCTGGTAGC GCTCGGCTGG 840
GCCCTGCAGC TGGCTGGGGG AGGCCTCTCT GTGGCCACAC GCCTGAGGTC TGGGCTGGTT 900
CCCCTTGCTG CTGCCTCTCT CCTGGGTGGA CAGTGGTCTA GAGCTGTGCT GGGGGCCCCG 960
TCCTTCCTCC TATGCACCAG GCTCAGCGAG AGGCAAAGGC GAAGGTGTGA AATGACTTTG 1020
ACCTTGGTGT TTAGGCAGAT CCCTCTCACT CTGAAAGTGC TTCAACATGT TGGCCTGGTA 1080
CGTTCCGAGC ACTGTGGAGT TTTGGCAGAG TGGCCGATAA GTATTTTTAG TTCCTTCCTC 1140
CTTAATGTTT GCCAGAAAAC CACAGTCATT ACTCATGAGG AGGAGAAGTT TCCTCCCTCC 1200
CAGGCTCCAG AAGAGTCCGG GCTTGCCCTC AGATGCCCAC TGAGCTGCCC CTGCCTGGGC 1260
TTCTAAGCTG TCTTTGAAAT CAACATAATG CTAACACCTA CAATAAAGCA GGATACCATA 1320
TATTTTTTAA TAGACTAAGA CCTGAGCTTT TTTTTGTTAA TTAATTTGGT GTTTTTTTTT 1380
TTTTTTTTTT TTTGAGATGG AGTCTTGCTC TGTTACCAGG CTGGAGTGCA GTGATGCGAT 1440
CTCAGCTCAC TGCAACCTCC ACCTCCTGGG TTTAAGCAAT TCTCCTGCCT CAGCTTCCCG 1500
AGTAGCTGGG ACTACAGACG CGAACCACCA TGCCCAGCTA ATTTTTTGTA TTTTTAGTAG 1560
AGATGGGGTT TCACCATGTT GGCCAAGCTG GTCTTGAACT CCTGACCTCA GGTGATCTGC 1620
CCACCTCGGC CTCTCAAAGT GCTAGGATTA CAGGCATGAG CCACCGCACC CGGCCTTTTT 1680
TTTTTTTTTT TTTTTTGAGA TGGGGTCTCA CTCTGTCACC CGGGCTGGAA TGCAGTGGCA 1740
CCATCTCAGC TCATTACAAC CTCTACTTCC CAGGCTTAAG TGATCCTCCC ACCTCAGCCT 1800
CCTAAGTAAC TGGGACCACA GTCATGCGCC ACCACGCCTG GCTAATTTTT GCGTATTTTG 1860
TAGAGATGGG GTTTCATTAC GTTGTCCAGG CTGATCTTGG ACTCCTGAGC TCAAGTGATC 1920
CTCCCTCCGT GGCCTCCCAA AGTGTTGGGA TTACAGGTGT GAGCCAGCTT GCCTGGCCCA 1980
ATTTATTTGT TAAAATTCTA GTAAAATATA CCTATCATAA AATGTAATAT 2030