EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS094-00031

Organism

Homo sapiens

Tissue/cell

hMADS-3

Coordinate

chr1:1804530-1805000

Target genes

Number: 29
Name	Ensembl ID

SDF4	ENSG00000078808
DVL1	ENSG00000107404
MXRA8	ENSG00000162576
AURKAIP1	ENSG00000175756
CCNL2	ENSG00000221978
MRPL20	ENSG00000242485
VWA1	ENSG00000179403
ATAD3B	ENSG00000160072
ATAD3A	ENSG00000197785
TMEM240	ENSG00000205090
AL645728.2	ENSG00000215791
SSU72	ENSG00000160075
AL645728.1	ENSG00000215014
C1orf233	ENSG00000228594
MIB2	ENSG00000197530
MMP23B	ENSG00000189409
CDK11B	ENSG00000248333
SLC35E2B	ENSG00000189339
MMP23A	ENSG00000215914
CDK11A	ENSG00000008128
RP1	ENSG00000227775
SLC35E2	ENSG00000215790
NADK	ENSG00000008130
GNB1	ENSG00000078369
CALML6	ENSG00000169885
TMEM52	ENSG00000178821
C1orf86	ENSG00000162585
SKI	ENSG00000157933
RER1	ENSG00000157916

dbSUPER

Number of super-enhancer constituents: 6
ID	Coordinate	Tissue/cell

SE_09353	chr1:1800254-1805390	CD14
SE_11548	chr1:1800213-1805102	CD20
SE_23324	chr1:1804506-1805113	Colon_Crypt_1
SE_24044	chr1:1804580-1804996	Colon_Crypt_2
SE_41740	chr1:1804439-1805725	LNCaP
SE_58439	chr1:1751668-1840814	Ly1

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I001873

chr1

1804440

1805725

Enhancer Sequence

GTCTCACTAT GTTGTCCAGG CTGGTTTCAA ACTCCTGGCC TCAAGCCATC CTCCCACCTT 60
GGCCTCCCAA AGGGCTGGGA TTACAGGCAT GAGGCAGCAC TCCTGGCCTA TGCTAGGCCT 120
CATAACTTGC AATAAGCAAG GGAATGCAAC AGAGGTGACA CTGTGACTTC TAAACATGTC 180
CTCAAGTAGC CTGTCAAACT CTGCTCCTGC CCTTTTGGAA TTCAGCCACT ATGGGAGGAA 240
GCCTGAGCTA GACTGTTGGA GAGGCAGGCT GAGGAGATCA GAGGCACCCT GGCTGAAAGC 300
CCATGTGGGT GAGGGCAATG GGAAGCACAA GCCAGCCTAC CTGCCAACTG TTAATTGCCC 360
TTGCTAGCGT GGCCAGCACA GTGAACAGAG ATGAGCCCTG CCCACATCCA TACTCCCACA 420
TGATGATGAA CAAGGACTTA CTGTTTTAAG TCGCTTCATT TTGGGGTAGT 470