EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS094-00021

Organism

Homo sapiens

Tissue/cell

hMADS-3

Coordinate

chr1:1407540-1408180

Target genes

Number: 29
Name	Ensembl ID

SDF4	ENSG00000078808
B3GALT6	ENSG00000176022
FAM132A	ENSG00000184163
RP5	ENSG00000260179
UBE2J2	ENSG00000160087
SCNN1D	ENSG00000162572
PUSL1	ENSG00000169972
ACAP3	ENSG00000131584
CPSF3L	ENSG00000127054
GLTPD1	ENSG00000224051
TAS1R3	ENSG00000169962
DVL1	ENSG00000107404
AURKAIP1	ENSG00000175756
CCNL2	ENSG00000221978
RP4	ENSG00000224870
VWA1	ENSG00000179403
ATAD3C	ENSG00000215915
ATAD3B	ENSG00000160072
ATAD3A	ENSG00000197785
SSU72	ENSG00000160075
AL645728.1	ENSG00000215014
MIB2	ENSG00000197530
SLC35E2B	ENSG00000189339
MMP23A	ENSG00000215914
CDK11A	ENSG00000008128
RP1	ENSG00000227775
SLC35E2	ENSG00000215790
NADK	ENSG00000008130
GNB1	ENSG00000078369

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Myog	MA0500.1	chr1:1407662-1407673	CTGCAGCTGTC	-	6.62
Tcf12	MA0521.1	chr1:1407662-1407673	CTGCAGCTGTC	-	6.14

Enhancer Sequence

TGCCGCTCCT CGCTGCTGTC GGCAGCCACT TCCCGGGCGA GACTGCGCCC CCGGAGCACC 60
CCCGGCCGGA GCCGTCTCGC GTGCCGGGAG GATCGGACTC TTTCCGTCAC CCGTTTGCAC 120
CTCTGCAGCT GTCAGGAGCG GGTCAGGTGC GAAAAGCGGT GCGGAGGTGG CGCTCATAGG 180
TTACAGGGGT CAGGGTCTGG GGCTGGCCGT GGTCTTCAGT TACCGCCGAG CGTGCGGGAT 240
CCTTCTGCGC TTGCCGCCTC CACGTGGCAC AGGCCAAGGC GTGGCCAGAT GGGTAGATGG 300
GTTTGTTGGG TGGTTGCTAG CAGTTTCCAC GTAACAAGGG AAGCGTATTT GAGAGTTACT 360
TGATTCTAAC GAGACTAGCA GATTTGCACT TCTTGTTGGA AGACGTTAGC ATTTGCACGG 420
CGAGGTCTGT GAAGCCACAG GCCAGGCCGT GCTGCTCAGC TTGAGTAAAC CCCTGACCCA 480
AGGCCCTCAG GGTGTGAGCA CTGACTGCAC CTTCCCTAAG CTCGGGTCTC TTCCCCCAGC 540
CTTCCTTTCC CCTGTGGCTT TAACGATTTG TAGCACGATG CAGTTCAAAT GGCTAGGAGT 600
CTGGAACGTA GAAGGTGCTG AATTCATTGA AAGAATACAG 640