EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS092-01378

Organism

Homo sapiens

Tissue/cell

HFF

Coordinate

chr1:43825070-43825160

Target genes

Number: 24
Name	Ensembl ID

TMSB4XP1	ENSG00000236876
LEPRE1	ENSG00000117385
RP11	ENSG00000241784
ZNF691	ENSG00000164011
ATP6V1E1P1	ENSG00000225099
SLC2A1	ENSG00000117394
RP5	ENSG00000227533
WDR65	ENSG00000243710
CDC20	ENSG00000117399
ELOVL1	ENSG00000066322
RP1	ENSG00000229431
MED8	ENSG00000159479
SZT2	ENSG00000198198
HYI	ENSG00000178922
PTPRF	ENSG00000142949
KDM4A	ENSG00000066135
ST3GAL3	ENSG00000126091
SHMT1P1	ENSG00000224751
ARTN	ENSG00000117407
IPO13	ENSG00000117408
DPH2	ENSG00000132768
ATP6V0B	ENSG00000117410
B4GALT2	ENSG00000117411
CCDC24	ENSG00000159214

Number of super-enhancer constituents: 8
ID	Coordinate	Tissue/cell

SE_23264	chr1:43823493-43827031	Colon_Crypt_1
SE_23848	chr1:43824527-43825694	Colon_Crypt_2
SE_24762	chr1:43823482-43826203	Colon_Crypt_3
SE_31866	chr1:43823486-43825843	Gastric
SE_34471	chr1:43823189-43827267	HCT-116
SE_35010	chr1:43823254-43827460	HeLa
SE_57439	chr1:43824582-43825132	VACO_503
SE_65856	chr1:43823890-43825317	Pancreatic_islets

Enhancer Sequence

AGTGAGGTGC CAAAGGAACT GAGTGAGAGC AGCCTTCATA CTTTCTCCCT GGGGAGCCTG 60
GTCAGACTGT CTTCTCTTTC TCCGCCCCAG 90