| Tag | Content |
|---|
EnhancerAtlas ID | HS092-00055 |
Organism | Homo sapiens |
Tissue/cell | HFF |
Coordinate | chr1:1777960-1779980 |
Target genes | | Number: 43 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr1:1779804-1779825 | AAAAAAAAAGAAAAAGAAAAA | - | 6.09 | | IRF1 | MA0050.2 | chr1:1779827-1779848 | AAAACGAAAAAGAAAGAAGTC | - | 6.09 | | ZNF263 | MA0528.1 | chr1:1779891-1779912 | TCTCCTACCTCCCCTTCCACC | - | 6.04 | | ZNF263 | MA0528.1 | chr1:1779939-1779960 | CCCATCTCTTTCTCCTCCTCA | - | 6.29 |
|
| | Number of super-enhancer constituents: 8 | ID | Coordinate | Tissue/cell |
| SE_05682 | chr1:1777654-1779699 | Brain_Cingulate_Gyrus | | SE_09353 | chr1:1778042-1779840 | CD14 | | SE_11548 | chr1:1775764-1782854 | CD20 | | SE_23324 | chr1:1777926-1779592 | Colon_Crypt_1 | | SE_41740 | chr1:1777928-1778308 | LNCaP | | SE_41740 | chr1:1778865-1779471 | LNCaP | | SE_58439 | chr1:1751668-1840814 | Ly1 | | SE_61696 | chr1:1751792-1802253 | Toledo |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 3 | Chromosome | Start | End |
| chr1 | 1777961 | 1778126 | | chr1 | 1778482 | 1779200 | | chr1 | 1778529 | 1779605 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I001845 | chr1 | 1777178 | 1779972 |
|
Enhancer Sequence | ATGCCACTGC ACTCCAGGCT GTGAGACAAA GTGAGACTCC ATCTCAAAAT CAATCAATCA 60
ATCAATCAGA GTCTCACTGT CACCCAAGTG GGTGACAGCC TTGAACAGCT CACTGAAACC 120
TTGAACTCCT AGGCACAGCC ATCCTCTTGC CTCAGCCCCC TAAGTAGCAA GGATTCAGGC 180
ATGTGCCACA CTGCACGTGA CTAAATTTTT TGTTTCTTTA TGGAGAGAGG GTCTCACTAT 240
GTGGCCCAGG CTGGTCTTCA ACTCCTGGTC TCAAGCAATC CTCCTCCCTT GGCCTCCCAA 300
AGTGCTCAGA TTATAGGAAT GAGCCACTGG TTCTAGCTGA AAGTGAAGGA CTTAAAGCTA 360
GAGAATTTAA TGCCAGCAAA AGGGTGGCTT GATCAGTTTA GAAAGAGGGT TGGCTTAAAA 420
AATGTTAAGA TAACAGGAGA AGCAGTTTCT GCCAACCAAG AGGCACCAGG GTTCCCAGAT 480
GCCATGAAGA AAATCATTGA GGAAAAGAAA ATCTTCCTGA ATAGGTTTTT AATGCAGACA 540
AAAGTGCCCT ATTCTGGAAA AAACTGCCAC AAAGGACACT TATTAGTAAG GAAGAAAAGT 600
GAGCCCCAGC ACTGAAGGCA GGCAGGGAGA GGCCAACTCT ACTGCTTTGT GCAAATGCAG 660
CCGGGTTTAT GATCAGGACT GCTCTTATCT ACAAAGCTGC TAACCCCTGA GCCTTGAAGG 720
GGAAGAGATA AACACCAGTT GCCAGTCTCT TGGTTGTGGA ACAAGACTGG GACAACAAAA 780
TCCCTTTTTC TGGACTGGTT CCATCGATGT TCTTTGTCTG CAGTCAGGAA GTACACTTTG 840
CCAGTAAGGG ATTGCCTTTT AAAGTTCTTT AGATATTGGA CAAGGCCCCT GGCCACTCAG 900
AACCCCATGA GTTCAATACT GACGGCAATG AAGTGGTCTA CTTACCCCCA AACACAGCAC 960
CTCTCCTTCA GCCTCTAGAT TAGGGGGTCA TAAGGACCTT TAAGGCTCAT AACACACAGT 1020
ACTCTATGGA AAGAATTGTC AATGCTATGG AAGAGAATCC CAATAGACAG AACATTGTTT 1080
AAGTCTGGAA GGATTATCCT GCTGAAGATG CCAAGGTTGT TACAGAAAAA GCTGTGAAGG 1140
CCATGAGCCT GAAACAATCA ACTCCTGCTG GAGAGGACGA CGTCCAGATG CTGCGCCTGA 1200
CCTCACAGGA TTTACGAGAG CCAGACGAGG AAATCATGAA AAGACTGTGC ATATGCTTTT 1260
AAAAGGGTAG GGGGGTGGGT AAGGACTTCA ACATGTGGAT CTTAGAGAAA TTCAAGAGCT 1320
ATTAGACACC ACACCAGAGG AATTAACAGA ACACACCTTG ACAGATGTCA GTACTTCCAA 1380
CGTGGTGCCA AACGATGAGA AAGAAGCAGT GCCAAAAACA CGTGGACACT GGGCAATCTG 1440
GCAGAAGGTC CCCATTCCCC AAGACTGCAC TTGACTTCTT TAGGACACAG AGCTTTTATG 1500
GCACAGGAAC TAAAACTAAA GCATACAACA GAAGGTTGCT ATCATACAGA AACTTTTTTA 1560
GAGAAATGAA AAAGCAGGCC GGGTGCGGTG GCTCAGGCCT GTACTCCCAG CACTTTGGGA 1620
GGCCAAAGCG GGCAGACCAC GAGATCAGGT GTTCCAGACC ACCCTGGCCA ACACAGTGAA 1680
ACTCTGTCTC TACTAAAAAT AAAAAAAATT AGCCGGGCAT GGTGGCGGGC GCCTGTAATC 1740
CCAGCTACTT GGGAGGCTGA AGCAGGAAAA CCGCTTGAAC CCAGGAGGCG GAGGCTGCAG 1800
TGAGCCAAGA CTGAGCCATT GCACTCCAGC CCAGGCAAAA AAAAAAAAAA AAAGAAAAAG 1860
AAAAAATAAA ACGAAAAAGA AAGAAGTCAG AAATTATGTA TTTCAGTAAA GTTCCACCAA 1920
GTATGCCTGT CTCTCCTACC TCCCCTTCCA CCACCTCCAT CCAAGACAGC AAGACCAATC 1980
CCATCTCTTT CTCCTCCTCA GCCTCAACCT GAAAATGAGA 2020
|
