EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS088-03494

Organism

Homo sapiens

Tissue/cell

HeLa-S3

Coordinate

chr1:148262900-148263900

Target genes

Number: 4
Name	Ensembl ID

RP11	ENSG00000223612
U1	ENSG00000207501
NBPF20	ENSG00000203832
PFN1P3	ENSG00000234367

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CUX1	MA0754.1	chr1:148263813-148263823	TAATCGATAA	+	6.02
CUX2	MA0755.1	chr1:148263813-148263823	TAATCGATAA	+	6.02
IRF1	MA0050.2	chr1:148263426-148263447	AGAATGAAAGAGAAAGACAGA	-	6.26

Enhancer Sequence

GACCCATCCC TTGCCTGGGC TTCCAGGTAG AACTAGAGTT TCATTCAACC TACATGTGCC 60
TATAGGTCCT CCCTGTGGCA ATGACATCTC TCAGCTCAGT AATGGCCACT TGGAGCAGGA 120
ATATGATCTT TATATGGAAG ACTCAGTGGA TCCTTATCAC CTTCATAGAA AGGTACTCAC 180
CTCCCACGTC GAGAGAAAAG CCAACATGTT TTTCCTCCAA TGCATAAAAG GAACTTCCAT 240
AGGGCTGGCA GGAGTCAGGC TGTTCAAGAC AACTGGAAGG AGTTGAATAA CATCTATCCA 300
GTGAGTCCTG CAAGACTTCA GGCTCTACTA CCTCCAGCAG CTCCCTGCTG AGCCTGGAAA 360
AGGAGGAAAA AGTAAAGAAT AAGCCAGGGG AAATCAGACA CAACAGAGCC CCAACTAGGT 420
TTCATGGGTA GCATAGGGAA GTGGTTAAAA AACTAAAAGG ATAGATCCAT TAATGAGGTA 480
ACAAATTATT GCCTTCATGT TGGGACAGAA CAGGGCCAAA TGGAAAAGAA TGAAAGAGAA 540
AGACAGATAG ACACACACAC ACACACACAC ACACACACAC ACACACACAC AGACACACAC 600
ACACACACAG AGAGAACGAG CTCAGTGAAT TGTCCAGGTG ACACACTGAT GAGGGAGTAA 660
CAGGACACTC TGAGTTAGTG CCCTCAGGAC ACACAGCATA CAGGGATCAT GAAAAGACTG 720
TGCTCAATAA TTTTCCATAA AATGTGCTCA AGTTTCCATG CAGTCGCCAT GAGAATACAG 780
TTTTTGAAGT CTGGTCCACC TACAGTAGGT TAGTAAATGA TAAGGGGAGG AAGAAATGGA 840
AACCTAAATA TCTACTGCAA TGAAAACCAA CAGCAATGTT AGTAGGAATA ATTCAGGCTT 900
GCTGGAAAAG ATGTAATCGA TAATGTCAGC CCGCTCTGTT TTCCCTGAAC CAGGAGTCTC 960
CAGATGTCAA CACAGAAGTA GCTGTTCACA ATTGCTCAGT 1000