EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS088-03142

Organism

Homo sapiens

Tissue/cell

HeLa-S3

Coordinate

chr1:109816290-109816640

Target genes

Number: 28
Name	Ensembl ID

HENMT1	ENSG00000162639
PRPF38B	ENSG00000134186
STXBP3	ENSG00000116266
GPSM2	ENSG00000121957
AKNAD1	ENSG00000162641
CLCC1	ENSG00000121940
RP5	ENSG00000237349
RP11	ENSG00000244716
WDR47	ENSG00000085433
RANP5	ENSG00000228054
TAF13	ENSG00000197780
TMEM167B	ENSG00000215717
SCARNA2	ENSG00000238881
KIAA1324	ENSG00000116299
C1orf194	ENSG00000179902
SARS	ENSG00000031698
CELSR2	ENSG00000143126
PSRC1	ENSG00000134222
MYBPHL	ENSG00000221986
SORT1	ENSG00000134243
PSMA5	ENSG00000143106
SYPL2	ENSG00000143028
ATXN7L2	ENSG00000162650
CYB561D1	ENSG00000174151
AMIGO1	ENSG00000181754
GNAI3	ENSG00000065135
GSTM4	ENSG00000168765
EPS8L3	ENSG00000198758

dbSUPER

Number of super-enhancer constituents: 4
ID	Coordinate	Tissue/cell

SE_05978	chr1:109790351-109821764	Brain_Hippocampus_Middle
SE_08667	chr1:109816196-109827024	Brain_Inferior_Temporal_Lobe
SE_26927	chr1:109815140-109821582	Esophagus
SE_36073	chr1:109815294-109819158	HMEC

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I109272

chr1

109815308

109821624

Enhancer Sequence

GAGTGAGTGT GGCCGGGTGG GCGGGACGGG GTGCAGCCCC TCGGAGGCCT CACCTGGGCC 60
CAGAGCTGCC TCCGGGCCTC CCCAGGTGAC TCTGGATGGC ATTTGGAGGA CAAATGGGCA 120
GAACTGGCCC AGCTCCCTTA CTATGCCGTG CCCACAAACC ATGGTGCCTT GCGGGGAGGG 180
CCACCCCTCC TAGGCTCTAC GCGGCGCAGC CCAGCCTAGG GCAGAGTGCG GGAGGATGGG 240
GAGCTGGGGG TGCTTTCCTG TTTCCTTCGT CTGGTGAAAG CTTTCACTCT CTCCTCTGTT 300
TCAACTAACC CTCTGTCTGC CTTTTCTGCC ACTTTCCTTT CCTGCCTCTC 350