EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS088-02926

Organism

Homo sapiens

Tissue/cell

HeLa-S3

Coordinate

chr1:94657730-94659520

Target genes

Number: 5
Name	Ensembl ID

RP11	ENSG00000230439
BCAR3	ENSG00000137936
DNTTIP2	ENSG00000067334
GCLM	ENSG00000023909
ARHGAP29	ENSG00000137962

dbSUPER

Number of super-enhancer constituents: 4
ID	Coordinate	Tissue/cell

SE_00508	chr1:94658817-94661927	Adipose_Nuclei
SE_38226	chr1:94658138-94661287	HUVEC
SE_45763	chr1:94658505-94660731	Osteoblasts
SE_47219	chr1:94655314-94659527	Panc1

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I094189

chr1

94655315

94661287

Enhancer Sequence

GTTCAGATGC AGTAAGCTAA CTTCTCCCGT CTCCCACTGA ATTCACCTAA AAATCTGAAC 60
AGAATGCACA AATCAAGACT CTGAAAAGTA AATGGAAATA AACTACAATT CAAGGTATGA 120
CCTATCCAGT GATAGGTCTA CTCCTGCCCT CTTTTCCAGC CCATGCTCAG CTCCTACCCA 180
ATTCTCCAAT TCCCAAAGTA CAAACTGAGT GCAGACAGAA GGAGCTCCAA GAGAGGTCCT 240
TTCTGGCCCA AGGAACAAAA GCGGGGAGGG GTGATGGGAG ATGAAACTAA AACAGTAGAA 300
GAAAACTCCC TGGTTTCTTT TGTATATTTA TTTTCTCTCC TGCCCCAGAC CCCAAGCAAG 360
TCCAAATCCC TAAGACACAA TCTTATGGGA GCAGCAATGA TGGCAGTAGC AGCTGAGGAG 420
ATGCCAAAAC TCTGATGGAA ATCCTTGTTT ATGACCAGAT GAACTGTAGT CTAGAGTGAG 480
AGGGTCTGAA ATTTCTGTTA CTTTTTTCTC TTTATCCTCC CCACACTTGG CCCTGGAGAA 540
GAGCAGAATA GGCAGACCTA AGCCCCCAGC CAGAAGATTA GGAAGGGAGT CACGCAGAAG 600
CTGGAAAATG AACCTAACTG TATCAAATGG CTGCTAAAAT TGAAAAAAAA AATTAATGCT 660
CAATATAGGT TATAAACAGG ACCCAGAGTC AATAAAGTAA TGATGAAAAT ATCTAGGATA 720
TCATTCAAAA TTACTTGTCA TACAAAGAAC CAGGAAAATC TCAACAACTC GCAAGACAAA 780
AGACAATAAA AAGACACCAA CCCTGATACA GCTCAGATTT GGGACGATTA GATGAAAAAT 840
CTACAACAAC TATTACAAAG GTTTCAAAAA AGTAGAGCAA ACAATCTTGA AACATGGAAA 900
AACAGAAGAA GTCTCAGCAA AGAAATGTAA GATATAAAGA AACAAAAGGA AAATTTATTG 960
CTGAAAAATA AAATATCCAG AACAAAAAAT TTACTGGATG AACTGTATGG GAGAATGGGG 1020
ATAACCAAAG GAAAAGAGAC TGTGAACTTG AAGACAGATC AACAGAACAC TATAAACAAC 1080
CAAGAGGAAA AAGCTTTGGG GAAAAAACAG AGGACCTCCA GAACTGCAGA AGATTAACAA 1140
AAGCTCTAGT GTTTGAGTCA CTGCCTGTCA GAGAAAGAGG AAAAAGAATA CTACAAAAAA 1200
AAAAAAAAAT TGAAGAAACA ATAGTTGAAA ACTTCTCAAA TTTTTCAAGA GTCAAACTTG 1260
TAGATTCAAG AAGTTCAACC AATCCAAAAC AGGAAAAACA GCAAAAACCA GGTCTAGATA 1320
CGTCTTAAAC AGATAAAATC CAAAGACAAA AAAAATCCCA CAAAAACAGC CAAAGAAAAA 1380
CACATGCCAC AATTGGGGAA TGATAATTCA TATGATTACT GGTATCTCAT GAGAAACTAC 1440
GGATGCCATA AGGCAGTGGA ACAATATTTT TAAAGCAGTG AAAGAACTGA TTTCTGTATT 1500
TAGAATTCTA TATCCAGTGA AGGTGTCCTT CAGAAATAAA GACGAAATAA AGACATTCTC 1560
ATATGAAACA CAACCAAGTG AATCCATTAC CAGCAGACCT GCTATAAAAT AGTGGTAAAG 1620
GAAGTTCTGT AGACAAAGTG TTACCAGAGG AAAGATGGAA CCACTAGAAT GCAAGAAGAA 1680
TGAATAGAAA TAGTAAATAA TAGACTACTT TTTTCCTCTT AACCTCTTTA TAATATGTAT 1740
GACTTTTAAA AGCAAAAATT ATGAGAGTCT GGTGAGGTTT TCAACGTATA 1790