EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS088-01909

Organism

Homo sapiens

Tissue/cell

HeLa-S3

Coordinate

chr1:45269060-45269150

Target genes

Number: 18
Name	Ensembl ID

TMEM53	ENSG00000126106
C1orf228	ENSG00000198520
RNU5F	ENSG00000199377
RP4	ENSG00000259794
RNU5D	ENSG00000200169
KIF2C	ENSG00000142945
RPS8	ENSG00000142937
RP11	ENSG00000225721
SNORD46	ENSG00000200913
BEST4	ENSG00000142959
PLK3	ENSG00000173846
TCTEX1D4	ENSG00000188396
BTBD19	ENSG00000222009
RP5	ENSG00000226499
CCNB1IP1P1	ENSG00000229815
EIF2B3	ENSG00000070785
HECTD3	ENSG00000126107
UROD	ENSG00000126088

Number of super-enhancer constituents: 20
ID	Coordinate	Tissue/cell

SE_01008	chr1:45269033-45270434	Adrenal_Gland
SE_01831	chr1:45267054-45278224	Aorta
SE_03831	chr1:45267567-45269331	Brain_Angular_Gyrus
SE_04529	chr1:45267157-45270277	Brain_Anterior_Caudate
SE_06454	chr1:45263798-45280273	Brain_Hippocampus_Middle
SE_13535	chr1:45268893-45269614	CD34_Primary_RO01536
SE_16953	chr1:45267025-45269626	CD4p_CD225int_CD127p_Tmem
SE_26084	chr1:45267146-45270191	Duodenum_Smooth_Muscle
SE_26880	chr1:45267071-45270568	Esophagus
SE_29688	chr1:45267031-45270060	Fetal_Muscle
SE_31689	chr1:45267126-45269239	Gastric
SE_34847	chr1:45264794-45276751	HeLa
SE_37253	chr1:45264597-45278304	HSMMtube
SE_41008	chr1:45267023-45270544	Left_Ventricle
SE_42249	chr1:45267046-45270620	Lung
SE_44852	chr1:45267561-45270134	NHLF
SE_46263	chr1:45267271-45270302	Osteoblasts
SE_50290	chr1:45267058-45270081	Sigmoid_Colon
SE_52471	chr1:45267106-45270278	Small_Intestine
SE_65466	chr1:45264359-45276830	Pancreatic_islets

Enhancer Sequence

AGAGTGAGTC TGGGGTGTCA GTGGGTTGAG GGGGCAGAGC AGTAGAGCGG CTTGTCACAT 60
TTGTCTTGGG TGTGTGAGTG TGGGTGCCTG 90