EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS088-01464

Organism

Homo sapiens

Tissue/cell

HeLa-S3

Coordinate

chr1:33049060-33051060

Target genes

Number: 7
Name	Ensembl ID

TSSK3	ENSG00000162526
RP4	ENSG00000225828
ZBTB8A	ENSG00000160062
ZBTB8OS	ENSG00000176261
RBBP4	ENSG00000162521
S100PBP	ENSG00000116497
YARS	ENSG00000134684

TF binding sites/motifs

Number: 7

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1	MA0050.2	chr1:33050099-33050120	TCTTTCTTTCTTTTTTTTTTT	+	6.25
Nkx3-2	MA0122.3	chr1:33049985-33049998	ATAAACACTTAAT	+	6.48
Nr2f6(var.2)	MA0728.1	chr1:33049577-33049592	CGAACTCTTGACCTT	-	6.06
PHOX2A	MA0713.1	chr1:33049243-33049254	TAATTAAATTA	-	6.62
PROP1	MA0715.1	chr1:33049243-33049254	TAATTAAATTA	+	6.32
PROP1	MA0715.1	chr1:33049243-33049254	TAATTAAATTA	-	6.62
Phox2b	MA0681.1	chr1:33049243-33049254	TAATTAAATTA	-	6.62

Enhancer Sequence

CACTCATAGG TTAAGACTAG ATTAGATTAT TCCAGTAATA CAAAGGTCAT TCAACATCCA 60
AGAAATCCAT TAATGTAATA TACCATTTTA ATAGATTGTT ATGGGTTAAA TTTGTTCCCC 120
CAAAATGATA TGATTAAGCC CTAATCTGCA GTCTTTTATT TGGAAATAAG GCCATTGAAG 180
ATGTAATTAA ATTAAGACAT GGTCACTAGG GTAGGGTGGG CCCTTAATCC AGTATCACTG 240
GTGTCCTTAT GAGAAGACAG TGTGAAGATG TGAGGAGAGA ATACTTTGGG TTTTTTGTTT 300
TTGAAATGGA GTCTCACTCT GTCACCCAGG CTAGAGTGCA GTGGCGGGAT CTCAGCTCAC 360
TGCAACCTCC GCCACCCAGG TTCAAGCGAT TCTCCTCCCT CAACCTCCCG AGTAGCTGGA 420
ATTACAGAGG CCCGCCACCA TGCCTGGCTC CTTTTCGTAT TTTTAGTAAA GACAGGGTTT 480
TACCATGTTG AGCTTACCAT GGTGACCATG TTGGTCTCGA ACTCTTGACC TTAAGTGATC 540
CACCTGCCTC GGCCTCCCAA AGTGCTGGGA TTACAGGTGT AAGCCACCAC ACCTGACCAA 600
GGAGGAGAGA ATACTTTGTA AAGATACAGA GACACACACG CAGGGAGAAG ATGGCCATAT 660
GAAGACAGAG GCAGAGATTG GGGATAAGCT GCTTCAAACC AAGGAACACC TAGGGCCACC 720
AGAAGATAGA ATGAAATAAA GAAGGATTCC TCCCTTACAG GTTTCAGAAA AACCATGGTC 780
CTGTTTGCAA TTTAATTTTG GATTTCTAGC CTCCAGATTG CAAGACAATA AAATTATATT 840
TTTTTAAGTT ACCTAGTTTG TGGTACTTTG TTATGGCAGC CCTAGGAAAC TAATATACAA 900
AGACGGGAAA ACGTATAAAT GCAGAATAAA CACTTAATAC AATTTAGCAC TAATTTACGA 960
TTTTTTAAGT TTTAGCAAAT TGAAAACAAA AGGGCACCAA TCAAACTCCT ATACTAAACG 1020
TCATCATTCT TTTTTTCTTT CTTTCTTTCT TTTTTTTTTT TTTTTTTTTT GAGATAGAGT 1080
CTGTCATTGT TGCCCAGGCT GGAGTGCAGT GGCACAAACA AGGATCACTG CAGCCTTGAG 1140
CTCCTGGGCT CGAGGGGTCC TGCCACCTCA GCATCCCATG TAGCTGGAAC CACAGGTGCA 1200
TGCCACCATG CCCAGCTAAT TTTTTTTGTT TTGTTTTGTT TGTAGAGACA GGATCTCACT 1260
TTGTTGCCTA GGCTGGTCTC AAACTCCTGG GCTCAAGTGA TCCTCCCGCC TTGGCCTCCC 1320
AAAGTGCCGC GATTAGAGGT GTAAGCCACC ATGCCCAGCC TAAACATCAT TGTTAATAGT 1380
TAAATTTTAG CAGTGTTTCC ATTCAGCAAA TGACGCCTGC TGTCATAGCC TCTTTTCCAC 1440
ACTTTATGGG AGATCCTAGC ACATGCAATA GGACAAACAT AAGAAATGAG ACAGAAAAAT 1500
GGGACTACAT GAAATAAAAC TCCTTATTTG CAGACATATA ATTATCTACG AAGAATGTTT 1560
CAGATTTCTT TTTTTTTTTT TTTTTTTTTT GAGAAGGGTC TTGCTCTGAG GCTCAGGCAG 1620
GAGTGCAGTG GCACCATCAT GACTTACTGC AGCCTCAACC TCCTGGGCTC AAGCAATCCT 1680
CCTACCTCGG CCTCCCAAGT AGCCAAGACC ACAGATATGT GCCATTTTCT TATTTTTGTA 1740
GAGACAGTCT CCCTATGTTG CCCAGGCTGC TCTTGAACTC CTGGGCTCAA GCGATTCTCC 1800
CAACTTGGCC TCCCAAAGTG CTGGGATTAT AGGTGTGAGC TATAGCACCT GGACTCAGAA 1860
AATCTCTGGA TAAACCATTA GAATAAGAGA CTTTAGCTAA TAAGAGAGGT TGCTACATAC 1920
CAGATTAATA TACAAATATG AATAGTATGC CTATAAACCA GTAATAATGC AATAGGAAAA 1980
AAAATGCCCA TTCACTATAG 2000