EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS088-00627

Organism

Homo sapiens

Tissue/cell

HeLa-S3

Coordinate

chr1:16055690-16056290

Target genes

Number: 13
Name	Ensembl ID

RP3	ENSG00000228140
EFHD2	ENSG00000142634
CTRC	ENSG00000162438
CELA2A	ENSG00000142615
SCARNA21	ENSG00000251866
RP4	ENSG00000237301
CHCHD2P6	ENSG00000235084
PLEKHM2	ENSG00000116786
SLC25A34	ENSG00000162461
RP11	ENSG00000237938
TMEM82	ENSG00000162460
FBLIM1	ENSG00000162458
SPEN	ENSG00000065526

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr2f6	MA0677.1	chr1:16056120-16056134	TGACCTTGGACCTG	-	6.02
Nr5a2	MA0505.1	chr1:16056118-16056133	GATGACCTTGGACCT	-	6.04

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

SE_48299	chr1:16052403-16056102	Psoas_Muscle
SE_51374	chr1:16052506-16056500	Skeletal_Muscle

Enhancer Sequence

TGGCAACCCC GCCCCTCTGG AAGGATTGGA GAGTTCGCAG CCGCCCATAG GTGTGGGTGG 60
CCTGGGGGTC AGGGGTGGAG GTGGAAAGTG GGAGATCCAG GAGGGGAAAC CAGATGTATT 120
CCCTCTGGAA CCTGCATCTG CTCAGAGAGG CAGGCAAGTA GACGACAATC ATAGGACTCA 180
TGTGGTCAGC CCAGGTGACC TCAGCCCCTG GCGACTCTTG GGGGTGCTAG CATGAGTTGT 240
TGGACAGGAA GGCAGGCAGA GAGCCATGCT GCTGGGCCAG GCGTGCCCTT GAACGCCTGC 300
ATCCTTGTCG TGGCTCAAGG TCCCACCCGT TGACGTCCTG CCCACCCTCT TTGTCTGTCT 360
TCCCTCACTG TCAAAATCCA AGGCCCCTTG GCCATTGAGA ACGATCAGGC CTGTTCCAGT 420
TGTCATTTGA TGACCTTGGA CCTGCGTCAT TGCCGCACCT GCCGCCCTGG TCACTGGGTC 480
TAGCCAGGTC TCTCCCCCAA GTTTCTGTGA CCCCTCCAGG CCAGCAGCGC TCAAGACTAA 540
GCCCTGTCCA GTTGAGGCCC TGTTCCCAGG CCTCTAACCA CAAACCTCAC TCCCTATGCA 600