EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS088-00489

Organism

Homo sapiens

Tissue/cell

HeLa-S3

Coordinate

chr1:11105600-11106610

Target genes

Number: 11
Name	Ensembl ID

C1orf127	ENSG00000175262
CFL1P6	ENSG00000215785
TARDBP	ENSG00000120948
MASP2	ENSG00000009724
SRM	ENSG00000116649
RP4	ENSG00000226849
EXOSC10	ENSG00000171824
MTOR	ENSG00000225602
ANGPTL7	ENSG00000171819
RPL39P6	ENSG00000238173
UBIAD1	ENSG00000120942

TF binding sites/motifs

Number: 8

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF16	MA0741.1	chr1:11105880-11105891	GGGGGCGGGGC	-	6.02
KLF5	MA0599.1	chr1:11105881-11105891	GGGGCGGGGC	-	6.02
Nr2f6(var.2)	MA0728.1	chr1:11106288-11106303	TGAACTCCTGACCTC	-	6.22
Nr5a2	MA0505.1	chr1:11106280-11106295	GCTGGCCTTGAACTC	-	8.25
RARA	MA0729.1	chr1:11106285-11106303	CCTTGAACTCCTGACCTC	-	6.73
SP1	MA0079.4	chr1:11105879-11105894	AGGGGGCGGGGCTAC	-	6.6
SP2	MA0516.2	chr1:11105878-11105895	CAGGGGGCGGGGCTACA	-	6.14
SP4	MA0685.1	chr1:11105877-11105894	CCAGGGGGCGGGGCTAC	-	6.39

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I011045

chr1

11105561

11107016

Enhancer Sequence

GGGAGAGGCA GGGCCAGGCA GGCCGTCAGG AGGGAAAGAG GCGGGATCCA GCCTGGACTC 60
CTCCCAGGAG ATCCATGACC TCAGAGTGGA CCTCAGAGGA GGCCTCGTCC TGTCTAGGGT 120
GCGGGACTGG TGCCGGGCCA ATCACCTTAC AGGCCTAGGG TCGCTGCAAG CTCCCAGCAG 180
CGCTGGGAGA AAGATGCAAA CATCACCTCT GTTAAACCAG TGGGAGTTTC AGTGTCCGGC 240
CCGAGGTCAC CCAGCTAATG AGGGGAGTCA ATCAAACCCA GGGGGCGGGG CTACAGCGCT 300
GAACCCTTGC AGCAGCTTCC TAAGGAGCAG AGAAATTGAG CCACTTGCCA GAGGTCACAC 360
AGTTGGTCTC TGCAGGGACT GGGATCTGAA ATCAAACATC CTGGCAGCGC TCCCGCTGGC 420
AGGGCCCCAC TTTGTCAGCT GTAAATGGGG CCCTCGGCCC CTGCGTCGTT TTTGTTTTTT 480
GTTTTTTGAG ACGGAGTCTA GCTCTGTCGC CCAGGCTGGA GTGTAGTGGT GCAATCTCTG 540
TTCACTGCAG CCTCCACCTC GCAGGTTCAA GCAATTCTCC TGCCTCAGCC TCCCTAGTAG 600
CTGGGATTCC AGGTGCGCAC CACCACGCCC AGCTAATTTT TGTAGTTTTA GTGGAGATAG 660
AGTTTCACCG TGTTGCCCTG GCTGGCCTTG AACTCCTGAC CTCAAATGAT CAGCCAGCCT 720
CGGCCTCCCA AAGTGCTGGA ATTACAGGCG TGAGCTGCTG CGCCCGGCCA GTCCCTGCGT 780
CACTTGAGGC GATGCTGTCC TCAGATCCCT GGCTCAGAGT TGGCACTCAG CCCATGTGAA 840
TGGAGGTCAC GGCTGTTTTG GTCTTTGCAT TGTGGATGAT GTCAGGCCAG AGGCCTCTCC 900
CCTGCCCTGG GAAAGGTGGG GAAACTGAAG GCAGGGCTGC CTGGCCTAAG ACAGAGTTAC 960
CCCCACAGCC AGCTGCGCAG ACTGAGATGT TGCAGGACCC CTCTTGGCTC 1010