EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS088-00144

Organism

Homo sapiens

Tissue/cell

HeLa-S3

Coordinate

chr1:2518390-2518520

Target genes

Number: 8
Name	Ensembl ID

RP11	ENSG00000182873
C1orf86	ENSG00000162585
AL590822.1	ENSG00000203301
SKI	ENSG00000157933
RER1	ENSG00000157916
RP3	ENSG00000229393
TNFRSF14	ENSG00000157873
FAM213B	ENSG00000157870

dbSUPER

Number of super-enhancer constituents: 13
ID	Coordinate	Tissue/cell

SE_10382	chr1:2514709-2518511	CD19_Primary
SE_11079	chr1:2505559-2519033	CD20
SE_12088	chr1:2514901-2518455	CD3
SE_16962	chr1:2514673-2519181	CD4p_CD225int_CD127p_Tmem
SE_17520	chr1:2514527-2519648	CD4p_CD25-_CD45RAp_Naive
SE_17944	chr1:2514368-2519655	CD4p_CD25-_CD45ROp_Memory
SE_19528	chr1:2514585-2519366	CD4p_CD25-_Il17p_PMAstim_Th17
SE_20377	chr1:2515112-2518729	CD56
SE_22594	chr1:2514546-2519072	CD8_primiary
SE_31841	chr1:2515975-2519175	Gastric
SE_52783	chr1:2514829-2519610	Small_Intestine
SE_54330	chr1:2514718-2519362	Spleen
SE_55522	chr1:2515866-2518497	Thymus

Enhancer Sequence

AGGCCGGGTG GACGCAGGGC GGTGGGCGCG TCCCTGGCTC CTTGCCCGGG CGTCCTGGCA 60
GCGATGGGGT GGTGGGGGCC GCGGGGCCTG GGCGGGGCTG GGGGCAACGG GGCGCGCCCA 120
TGACCCAGCC 130