EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS088-00084

Organism

Homo sapiens

Tissue/cell

HeLa-S3

Coordinate

chr1:1686140-1686810

Target genes

Number: 22
Name	Ensembl ID

PUSL1	ENSG00000169972
ACAP3	ENSG00000131584
RP5	ENSG00000240731
CPSF3L	ENSG00000127054
GLTPD1	ENSG00000224051
ATAD3B	ENSG00000160072
ATAD3A	ENSG00000197785
AL645728.2	ENSG00000215791
SSU72	ENSG00000160075
AL645728.1	ENSG00000215014
MIB2	ENSG00000197530
CDK11B	ENSG00000248333
SLC35E2B	ENSG00000189339
CDK11A	ENSG00000008128
RP1	ENSG00000227775
SLC35E2	ENSG00000215790
NADK	ENSG00000008130
GNB1	ENSG00000078369
TMEM52	ENSG00000178821
PRKCZ	ENSG00000067606
RP11	ENSG00000182873
C1orf86	ENSG00000162585

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nkx2-5(var.2)

MA0503.1

chr1:1686665-1686676

AACCACTCAAG

6.32

Enhancer Sequence

AGGTCCAGCA GGAGTCAGAG GGCATGCATC AGGGAAGTCA GTGGGGTCAG GGGCCCCACC 60
CCAGGGAGGC CAGTGGGAGT CAGAGGGCTC TTTCTTCTCC CAAGTTGACA CACTTCTGTG 120
CCTTTTTCTT TTTATTTTGA GATGGAGTCT CACTCTGTCA CCCAGGCTGG AATGCAGTGG 180
TGTGATCTTG GCTCACTGCA ACCTCTGCCT CCCAGGTTCA AGTGATTCTC CTGCCTCAGC 240
CTCCCAAGTA GCTGGAACTA CGGGTGCGCA CCACCACGCC CAGCTAATTT TTGTATTTTT 300
AGTAGAGACG GGGTTTCACC GTGTTGGCCA GGATGGTCTC ATCTCTTGAC CTCGTGATCC 360
GCCCGCCTCG ACCTCCCACA GTGCTGGGAT GACAGGCGTG AGCCACCGCG CCCGGCCGAC 420
ACTTCTGTGC CTTCTGAGAG TGAGAATCAG CTCACTTCTG CCCAACACAC ATGGCAGCTT 480
CAACCTGTGA TCTGCTGAAA CTTCTCAGTG TCAGTAAAAG GTTTGAACCA CTCAAGATTT 540
AGAAATCCCT GAATCTTGAA ACCTTTAAAT GTTGCTCCAT GCATCATTAA ATGAAAATAA 600
ACCCCCCGCA AGCAAGCGAG ACAGCAGCGC CATGATCAGA GCTCCTGTGG GCTCCAGAAC 660
ATTCCAACTC 670