EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS086-00093

Organism

Homo sapiens

Tissue/cell

HEK293

Coordinate

chr1:1890650-1891400

Target genes

Number: 20
Name	Ensembl ID

ATAD3A	ENSG00000197785
TMEM240	ENSG00000205090
AL645728.2	ENSG00000215791
SSU72	ENSG00000160075
AL645728.1	ENSG00000215014
C1orf233	ENSG00000228594
MIB2	ENSG00000197530
MMP23B	ENSG00000189409
CDK11B	ENSG00000248333
SLC35E2B	ENSG00000189339
MMP23A	ENSG00000215914
CDK11A	ENSG00000008128
RP1	ENSG00000227775
NADK	ENSG00000008130
TMEM52	ENSG00000178821
RP11	ENSG00000243558
C1orf86	ENSG00000162585
AL590822.1	ENSG00000203301
SKI	ENSG00000157933
RP4	ENSG00000238240

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1	MA0073.1	chr1:1890653-1890673	ACATAAAACAACCCCCACCA	+	6.3
RREB1	MA0073.1	chr1:1890776-1890796	CCCCCCTCCACCCACCCCCA	+	6.88
RREB1	MA0073.1	chr1:1891352-1891372	CCACCCACCACCACCTCCCC	+	7.1

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I001959

chr1

1890883

1892394

Enhancer Sequence

AAAACATAAA ACAACCCCCA CCACAATACA CTTCTGCAAC TTTTGTGTGT TTTGTTTTTT 60
TTTTGGACAG GGTCTGGCTC TGTTGGCCAG GCTGGGGTGC AGTGGCACCT GCTCGATTCA 120
CTGCAACCCC CCTCCACCCA CCCCCACCTG GGGTCCAAGC GATCCTCCCA CCTCAGCCTC 180
TCCACTAGCT GGGATTACAG GCATGCGCCA CCATATCTGG CTAATTGTAT TTTTTGTAGA 240
GACGGGGTCT CGCCATGTTG CCCAGGCTGG TCTTGAACTT CTGGGCTCAA GCGACCCTCC 300
TGCCTTGGCC TCCCAAAGTG CTGGGATTAC AGGCATAAGC CACCACACCC CTCCCTCCTG 360
TAACTTTAGC CTGTTACATG TGCCGTGGCT ACCTGGGCCA GGGCCGCCTG CCACCTGCCC 420
AGCTCGGGTG ACCCCAGGGG AAAGAGTCAG TAGAGGGCAT CTCAGGAGGG CTGGACACTA 480
GCTTCCTGGA ACATCCCAGC CCTCCCGACT TAGACCCGAG AGTGCACGCC CTCGGCCACT 540
AACCCAGAGG AGCTGCGCCG CGGTTCTGCC CAGCATTCAG GAATATGTTG AGTGTATTTT 600
TGGAAGTAAA ATAGCAAAAC AGGGGCCTGC GTGATCCTCA CTGAGAGGCC AAGTGCATCC 660
TTCCCCCATC ATGTTCTGCG CCACCATGCC CGATCACAGG CTCCACCCAC CACCACCTCC 720
CCTTCGAGAG AGAACGGGCC CCTCTGACTC 750