EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS086-00086

Organism

Homo sapiens

Tissue/cell

HEK293

Coordinate

chr1:1654370-1655690

Target genes

Number: 23
Name	Ensembl ID

SDF4	ENSG00000078808
B3GALT6	ENSG00000176022
UBE2J2	ENSG00000160087
PUSL1	ENSG00000169972
ACAP3	ENSG00000131584
RP5	ENSG00000240731
ATAD3A	ENSG00000197785
TMEM240	ENSG00000205090
AL645728.2	ENSG00000215791
SSU72	ENSG00000160075
AL645728.1	ENSG00000215014
C1orf233	ENSG00000228594
MIB2	ENSG00000197530
MMP23B	ENSG00000189409
CDK11B	ENSG00000248333
SLC35E2B	ENSG00000189339
MMP23A	ENSG00000215914
CDK11A	ENSG00000008128
RP1	ENSG00000227775
SLC35E2	ENSG00000215790
NADK	ENSG00000008130
GNB1	ENSG00000078369
CALML6	ENSG00000169885

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

REST

MA0138.2

chr1:1655364-1655385

ACTAGCACACTGGACAGCTGC

6.14

dbSUPER

Number of super-enhancer constituents: 7
ID	Coordinate	Tissue/cell

SE_14824	chr1:1653733-1657099	CD4_Memory_Primary_7pool
SE_21244	chr1:1654255-1657134	CD8_Memory_7pool
SE_23186	chr1:1654223-1656981	Colon_Crypt_1
SE_23960	chr1:1654817-1656465	Colon_Crypt_2
SE_30279	chr1:1654808-1657454	Fetal_Muscle
SE_52748	chr1:1654127-1657056	Small_Intestine
SE_53825	chr1:1654205-1657234	Spleen

Enhancer Sequence

ATTAAGAATA AGAAGTTGTG CCCGGCGCAG TGGCTCAAGA CGGTAACCCT AGCACTTTGG 60
GAGGCCGAGG CGAGCAGATC GCTGGAGTTC CGGAGTTCAA CACCAGCCCG GGCAACATGG 120
CAAAACCTCG TCTCTACAAA AAATACAAAA GTTAGCCCAG TGTGGTGGCG CGTGCCTGTA 180
TTCCTAGCTA CAGGAAGGAG GCTGCTAGAG GCAGGAGGAT CACTTGAATC AGAGAGGTCA 240
AGGCTGCAAT GAGCCAAGAC TGCGCCACTG CACTCCAGCC TAGATAACAA AGTAAGACTT 300
GGTTAAAAAA AAAAAAAAAA AAAGGTAAGC TCTAGGCTGA GGCGGGTGGA TCACAAGGTC 360
GGGAGGTCAA GACCAGCCTG GCCAACACGG CGAAAACCCT GTCTCCACTA AAAATACAAA 420
ACTTAGCTGG GCGTGGTGGC GGGTGCCTGT AATCCCAGCT ACTCGGGAGG CCGAGGCAGC 480
AGAATCGCTT GAATCCGAAA GGCGGAGGTT CCGGTGAGCC GAGGTCGCGT CACTGCACTC 540
CAGCAAGACC CCGTCTCAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AACAAGAATG 600
ATAAGTTGTA AGCCAGGCAA GGTGGCGAGC GCCTGTAGTC CCATATACTC TGCAAGCTGA 660
GATGGGAGAC CGATTGAGCC CAGGAGTTCC AGGCTGAAGT GCGCTTGTGA ACAGCCACTG 720
CGCTGCAGCA TGGGCGACAA AAAAGAGTGA TGGGTTCTGA AAAATGACCG CTTGAAATCA 780
AGTCTCGTTT CTGTCATTCT TGTATGGTCT TGGGTAACGT AATTCACCTC AGTTCAGTCT 840
TCCGTACAAC CAGAATAACA ACACCTACGT GATAGTATCG ATCGCGGATT AAAGATCATC 900
CGTTTAAAGG CTCTTAACTC AGGACCTGCC ACTCATCAAA CACTGCTTTT ACTGTCAGAA 960
TCTGCTAGAA AGACCGCTTG GACTACGTGA AGCCACTAGC ACACTGGACA GCTGCACCTT 1020
GAGACCGGGG AGATGCTCCG AGATGTGCTC GCGAACAAGG CCACCTGACC CGGGCACTGG 1080
GCTATTTCCT CGGGTTCAGT CCCGCACACT TGAGGTTCAG CCTGGCAGAC GTTGGCTCCA 1140
GACAGCGTTT GGACCCGCCG CCTCCACCAC CCAAAGTTCC GTGCGGGATG AGACTGTCCG 1200
CGGAAGCGAG GGTGTCGCTC GCCCCCGGGC CCGGGTCCGC CCCGCTCCGA GGCCTGCTCG 1260
GAAGAAAGAC CTCGGTGCGC AGTTCTCGTC GCGCTCCCAC ACCTGGTCCG CCCAGTCGGA 1320