EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS076-03761

Organism

Homo sapiens

Tissue/cell

Coordinate

chr1:149916960-149918380

Target genes

Number: 26
Name	Ensembl ID

HIST2H2BF	ENSG00000203814
HIST2H4A	ENSG00000183941
HIST2H2BC	ENSG00000220323
RP11	ENSG00000261716
HIST2H2BD	ENSG00000203819
HIST2H2AA4	ENSG00000203812
HIST2H2BE	ENSG00000184678
BOLA1	ENSG00000178096
HIST2H2AC	ENSG00000184260
HIST2H2AB	ENSG00000184270
SV2A	ENSG00000159164
SF3B4	ENSG00000143368
MTMR11	ENSG00000014914
OTUD7B	ENSG00000163113
VPS45	ENSG00000136631
PLEKHO1	ENSG00000023902
ANP32E	ENSG00000143401
CA14	ENSG00000118298
snoU13	ENSG00000238526
C1orf54	ENSG00000118292
APH1A	ENSG00000117362
C1orf51	ENSG00000159208
MRPS21	ENSG00000187145
PRPF3	ENSG00000117360
RPRD2	ENSG00000163125
MCL1	ENSG00000143384

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

MEF2A	MA0052.3	chr1:149918097-149918109	ACTAAAAATAGA	+	6.27
MEF2B	MA0660.1	chr1:149918097-149918109	ACTAAAAATAGA	+	6.32
MEF2C	MA0497.1	chr1:149918095-149918110	CTACTAAAAATAGAA	+	6.57
NFKB1	MA0105.4	chr1:149917012-149917025	GGGGGAATCCCCC	-	6.17
NFKB1	MA0105.4	chr1:149917012-149917025	GGGGGAATCCCCC	+	6.2

Enhancer Sequence

GAGCCTGGAA GAGACAAGAA CACTGTTGAC AGTTATCCCA GCAGCCTGGG GTGGGGGAAT 60
CCCCCAGGGA CCTCTAGCCC ATCCATCTGG CTCAGGGAGC TCCCTGCAGC CATGGCTATA 120
GAAATTAGCC AGGTAGAAAA GGATGGACAC CTATGAACTC CGTCCTCTGA GTGATTGCCT 180
AGTGACTGCC TTGCTCCAGA GAAGGGCTTC TGTCATGATG AGGGAAGGGT CACCCAGGAT 240
GGCACTGTCC TTCCTGGGTT CCAGTCAGTC AGCTTTCTCC CCCACTGCAA TCTGACTCCC 300
TTCTGTAATA AGGAGATAGT AGAATAAAGC CTTACTGTTC ATTTAGAACA ATGAGCAACC 360
ATATGATACG TGGCTTCCGG GTGAGAGGCC CAGACATTAG AATGTTCTTT ATTATACATT 420
TCTCTATGCC AAATTCTGCT CGAAACTAAT CTCAAGAAAG TCTTGACTAA TCAAAACTAA 480
CCAAGTCTAG CCACTTTGCA TCCCCTCAAC TTTTATACAT TCTGCATTGG AGTTATCAAT 540
TTGACCCTAC TCCTGTGCTC CTGTTCTAAC TCAGAGCCCA CTGAATTAGG AGCTCTTTAA 600
GCTACTCCGT CTCCTAGTGC CCAAAACAGA GGTCTATCTA CAGAAGACTT TGGACGAAAT 660
AATGATCATC TCAAGTTCAA CAAACAGTCC AGAAAACCTT TCTTAAAGAA TATGTTAAGC 720
CAGGCACGGT GGCTCATGCC TGTAATCCCA GCACTTTGGG AGGCCGAGGT GGGTGGATCA 780
CCTGAGGTCG GGAGTTCCAG ACCAGCCTGA CCAACATGGA GAAACCCCAT CTCTACTAAA 840
AATACAAAAT TAGCCGGACG TGGTGGTGCA TGTCTGTAAT CCCAGCTACT CAGGAGGCTG 900
AGGCAGGAGA ATCGCTTGAA CCCAGGAGGC GGAGGTTGCA ATAAGCTGAG ATCGCACCAT 960
TGCACTCCAG CCTGGGCAAA AAGAGTGAAA CTCCATCTCA AAGAAAAAAT AATAATAATA 1020
ATAATAATAT GTTTTAGGTC AGGCGCGGTG GCTCACGCCT GTAATCCCAG CACTTTCGGG 1080
GGCCAAGGCA GGCGGATCAC AAGACCAGCC TGGCCAACAT GGCGAAACCC CATCTCTACT 1140
AAAAATAGAA AAATTAGCTG GACATGGTGG CGGGCACCTG CAATCTCAGC TACTCGGGAG 1200
GCTGAGGCAG GAGAATCGCT TGAACCCAAG AGGTGGAGGT TGCAGTGAGC TGAGATCGTG 1260
TCATTGCACT CCAGCCTGGG CATCAAGAGC AAGATTCCGT CTCAAAAAAT ATATATATGT 1320
TTTAGTATCA GATAACAGAG ACTGGCTGGA GAGGAGATGT GGAAAACAGG AGACTAACGG 1380
TTTTTAAAAA GCAGGAAAGG GCTGGGTGTG GTGGCTCATG 1420