EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS076-01125

Organism

Homo sapiens

Tissue/cell

Coordinate

chr1:23885510-23885610

Target genes

Number: 13
Name	Ensembl ID

HNRNPR	ENSG00000125944
RP4	ENSG00000232482
TCEA3	ENSG00000204219
ASAP3	ENSG00000088280
E2F2	ENSG00000007968
RP1	ENSG00000235052
ID3	ENSG00000117318
MDS2	ENSG00000197880
RP5	ENSG00000203589
AL031295.1	ENSG00000244609
TCEB3	ENSG00000011007
PITHD1	ENSG00000057757
LYPLA2	ENSG00000011009

dbSUPER

Number of super-enhancer constituents: 51
ID	Coordinate	Tissue/cell

SE_01721	chr1:23881555-23889029	Aorta
SE_02313	chr1:23880411-23890687	Astrocytes
SE_02990	chr1:23884492-23886038	Bladder
SE_03649	chr1:23885062-23885830	Brain_Angular_Gyrus
SE_04396	chr1:23879698-23893339	Brain_Anterior_Caudate
SE_05716	chr1:23884539-23893433	Brain_Cingulate_Gyrus
SE_06239	chr1:23879137-23896940	Brain_Hippocampus_Middle
SE_07293	chr1:23879799-23891454	Brain_Hippocampus_Middle_150
SE_08579	chr1:23879631-23889266	Brain_Inferior_Temporal_Lobe
SE_09076	chr1:23885282-23885587	Brain_Mid_Frontal_Lobe
SE_10300	chr1:23881528-23889322	CD19_Primary
SE_11050	chr1:23879915-23891055	CD20
SE_15327	chr1:23879943-23887180	CD4_Memory_Primary_7pool
SE_23281	chr1:23881538-23887207	Colon_Crypt_1
SE_23782	chr1:23880320-23886743	Colon_Crypt_2
SE_24936	chr1:23880181-23887578	Colon_Crypt_3
SE_26335	chr1:23880230-23891207	Duodenum_Smooth_Muscle
SE_27258	chr1:23879627-23889266	Esophagus
SE_27884	chr1:23881506-23891164	Fetal_Intestine
SE_28880	chr1:23879864-23891096	Fetal_Intestine_Large
SE_29676	chr1:23879484-23891086	Fetal_Muscle
SE_31953	chr1:23879692-23889254	Gastric
SE_33209	chr1:23884655-23885975	H1
SE_34477	chr1:23879886-23889360	HCT-116
SE_34689	chr1:23879661-23892014	HeLa
SE_37153	chr1:23883971-23890769	HSMMtube
SE_38016	chr1:23879610-23890311	HUVEC
SE_38999	chr1:23881526-23889831	IMR90
SE_41075	chr1:23879494-23889265	Left_Ventricle
SE_42328	chr1:23879505-23889255	Lung
SE_44435	chr1:23881522-23891710	NHDF-Ad
SE_45002	chr1:23880488-23890059	NHLF
SE_45797	chr1:23881239-23891813	Osteoblasts
SE_48755	chr1:23879678-23889199	Right_Atrium
SE_50077	chr1:23879574-23889256	Sigmoid_Colon
SE_51741	chr1:23881505-23890978	Skeletal_Muscle_Myoblast
SE_52549	chr1:23879678-23889244	Small_Intestine
SE_53706	chr1:23879544-23889256	Spleen
SE_54840	chr1:23879569-23891890	Stomach_Smooth_Muscle
SE_55341	chr1:23884491-23886753	Thymus
SE_56054	chr1:23880611-23891108	u87
SE_57520	chr1:23885507-23886083	VACO_503
SE_58372	chr1:23873313-23964782	Ly1
SE_63038	chr1:23880110-23890040	Tonsil
SE_63528	chr1:23881481-23891076	HSMM
SE_66590	chr1:23885045-23886056	Jurkat
SE_68324	chr1:23879596-23905390	TC32
SE_68325	chr1:23879596-23905390	TC32
SE_68477	chr1:23874949-23904689	TC71
SE_68478	chr1:23874949-23904689	TC71
SE_69046	chr1:23884460-23886904	H9

Enhancer Sequence

CTGATTAGAG GAAAAGAGGG AAGAGTTACG CGAGGCAATC GGGAGCTCCG AGGGTCCCGC 60
AGCATCCTTG CCTGGGTGTT CAGCCCTGTC CCGACTTCGA 100