EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS076-00193

Organism

Homo sapiens

Tissue/cell

Coordinate

chr1:3701780-3702450

Target genes

Number: 13
Name	Ensembl ID

ARHGEF16	ENSG00000130762
RP11	ENSG00000238260
TPRG1L	ENSG00000158109
TP73	ENSG00000078900
WRAP73	ENSG00000116213
RP5	ENSG00000235131
CCDC27	ENSG00000162592
RP1	ENSG00000235169
LRRC47	ENSG00000130764
CEP104	ENSG00000116198
DFFB	ENSG00000169598
C1orf174	ENSG00000198912
RP13	ENSG00000236423

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF13	MA0657.1	chr1:3701890-3701908	ACGCCACGCCCCTTTCCG	+	6.27
KLF14	MA0740.1	chr1:3701891-3701905	CGCCACGCCCCTTT	+	6.18
SP3	MA0746.2	chr1:3701891-3701904	CGCCACGCCCCTT	+	6.02
SP4	MA0685.1	chr1:3701889-3701906	CACGCCACGCCCCTTTC	+	6.42

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I003785

chr1

3701631

3702227

Enhancer Sequence

GCAGTGATGA GCAAGGTCTC TTGTGCCCTG AAGCCCAGCG AGGTGTCCAC ACTTCACCCT 60
TGGCTGGGCT GTGTGCCAGG AAACCCTCCC GGTCCAAGGT CTTCACAACC ACGCCACGCC 120
CCTTTCCGAG ACAGGGCTCC CCTCCAACTC CTCTCCACCC GGCCAGCCAG GCACTCACTT 180
TGTGGAATCA CCATCAGGAA AACTATCTTA ACCTATCAAT CAGCAGACTT TCTTCCTTCT 240
CTAATTCTGA CATAATATTT GAGATTTCAA AGAACCCATC TTGAACTAAA ATGTAAATAA 300
AGGCTGAGCT TTAAGTTGTA AAGCCCTGGC TGTGATGCCT GTTCCCTTCC TCCCCAAGCT 360
GCAGGCAGGA CTCTCACGAC AGTCACTCTC GGCCCGCCAT GCTCTGTCGC TGCCACTGCG 420
GGGCGCACGA GACTTTCCCC TGGGCACAGA GGTGCTTTAT ATTTTAAAAG TTGGTCAGGT 480
GTCACAGAAA AGCAACTGGG AAGTTAGTCT TGCCAAAACC TAAACAATTC ACAGAAGAAT 540
GTGCTGGCAA GAGTTGATGA CTTTAATACT GTCTTACATA AAACAAAATG TGTGATTTAC 600
TGCAGAAGTC AGAAAACCCA CCAAAATATC AAAAAATCAA GGAACCCTGA TTTTCCTTTT 660
TTTTTTTTTT 670