| Tag | Content |
|---|
EnhancerAtlas ID | HS073-01236 |
Organism | Homo sapiens |
Tissue/cell | GM19238 |
Coordinate | chr1:204499950-204500890 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| LHX6 | MA0658.1 | chr1:204500586-204500596 | GCTAATTAGT | - | 6.02 | | SP2 | MA0516.2 | chr1:204500238-204500255 | GAGTGGGTGGGATTTAG | - | 6.23 |
|
| | Number of super-enhancer constituents: 7 | ID | Coordinate | Tissue/cell |
| SE_10255 | chr1:204499973-204500835 | CD19_Primary | | SE_10905 | chr1:204496806-204503042 | CD20 | | SE_18616 | chr1:204499631-204500832 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_30920 | chr1:204493761-204500802 | Fetal_Thymus | | SE_58430 | chr1:204415099-204506026 | Ly1 | | SE_59413 | chr1:204449600-204501284 | Ly3 | | SE_61475 | chr1:204430067-204500813 | Toledo |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 2 | Chromosome | Start | End |
| chr1 | 204500000 | 204500763 | | chr1 | 204500178 | 204500322 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I204530 | chr1 | 204499421 | 204501041 |
|
Enhancer Sequence | AACAGTGAGG GCTTGCGTAT CTTTTTGGGT GCTTATACCT AGCCACTTAA TTTCTATGGG 60
TTATTAATAT TTATTACTTC ACTCAACAAA TATGTAAGAG CCTACATATG TTAGGTAGCC 120
TATGAGGCAC TGAGAATATG GTAATGAGCG ACACACAGTC TGATTTTATG GAGTATACAG 180
AGTAGTGAGT CAGTAGATGC TCTTGCCCAT CTTAGTCAAA TAATCACACT AATTCATGGT 240
AAACCTACAC TATGGCAAGT GCTACAGAAA AGAGATACAT GAAGCAGGGA GTGGGTGGGA 300
TTTAGAGTGT TAGAGGTCAA GAAAATGTTC TTTTGAGGAA GTGAAATTTC AGCCAAAAGC 360
TGAAAGATAG ATAATTAAGT AGTCAATCAG AGAGTTTGAG GTTGATTGAA CACCATGTGT 420
AAAGGCCTGG GTAGGAGGAA GCTTGATGTG ACTAGGTTAG AATTTTGTGA AATAATTGTT 480
GGAGAGGGAG GAAGAGTGAG CAGATGAGAG AAATGTAGAA TTGCTGGGCA GTTAGAGGTT 540
GATGATGAGC CTGGTAAGAA TCACAGTAGG GCTAACCTGA CCTGTTACTT TTCTCCAGCT 600
GCATGGGGTG TAAGTTATTA GCTTATATAG TCAAAAGCTA ATTAGTAATT TAGAAGCTCT 660
CTTTCTCTAT AGCTTTGATG ACTGCTGCTT CTGAGCTCAT TCTGTCTTAC ACTAAGACTT 720
CCCTTAGCTG GGTGTGGTGG CTCAAGCCTG TAATTCCAGC ACTTTGGGAG GCTGAGGTGG 780
GTGGATCACC TGACTTCAGG AGTTCAAGAC CAGCCTGGCC AACATAAGTG AAACGCCGTC 840
TCTACTAAAA ATACAAAAAA TTAGCTGGGC GTGGTGGCGG GCGCCTATAA TCCTAGCTAG 900
TAGGGAGGCT GAGGCAGGAG AATTGCCTGA GTCCGGGAGG 940
|
