Tag | Content |
---|
EnhancerAtlas ID | HS073-00461 |
Organism | Homo sapiens |
Tissue/cell | GM19238 |
Coordinate | chr1:40864330-40868960 |
Target genes | Number: 16 | Name | Ensembl ID |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
DMRT3 | MA0610.1 | chr1:40867920-40867931 | TTTGATACATT | - | 6.02 | Foxd3 | MA0041.1 | chr1:40866935-40866947 | AAACAAACAAAC | - | 6.32 | HES2 | MA0616.2 | chr1:40868263-40868273 | GGCACGTGCC | + | 6.02 | HES2 | MA0616.2 | chr1:40868263-40868273 | GGCACGTGCC | - | 6.02 | IRF1 | MA0050.2 | chr1:40865151-40865172 | TCTTTCTTTCTCTTTTTTTTT | + | 6.9 | LMX1B | MA0703.2 | chr1:40864481-40864492 | GTTTTAATTAA | + | 6.14 | ZBTB18 | MA0698.1 | chr1:40867382-40867395 | TGTCCAGATGTTG | + | 6.05 |
|
| Number of super-enhancer constituents: 27 | ID | Coordinate | Tissue/cell |
SE_03839 | chr1:40865351-40865884 | Brain_Angular_Gyrus | SE_04329 | chr1:40865107-40866704 | Brain_Anterior_Caudate | SE_04329 | chr1:40867235-40868072 | Brain_Anterior_Caudate | SE_04329 | chr1:40868151-40869137 | Brain_Anterior_Caudate | SE_09232 | chr1:40854600-40864981 | CD14 | SE_09232 | chr1:40864987-40871101 | CD14 | SE_10167 | chr1:40863945-40871047 | CD19_Primary | SE_10889 | chr1:40837614-40877708 | CD20 | SE_11872 | chr1:40865290-40866496 | CD3 | SE_14445 | chr1:40865130-40866832 | CD4_Memory_Primary_7pool | SE_17325 | chr1:40838557-40873402 | CD4p_CD25-_CD45RAp_Naive | SE_18386 | chr1:40853889-40871285 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19424 | chr1:40865020-40866819 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20011 | chr1:40865177-40866460 | CD56 | SE_22383 | chr1:40865273-40866472 | CD8_primiary | SE_22383 | chr1:40868029-40871034 | CD8_primiary | SE_32537 | chr1:40865161-40868928 | GM12878 | SE_40132 | chr1:40865155-40866352 | K562 | SE_50468 | chr1:40865482-40866266 | Sigmoid_Colon | SE_53508 | chr1:40854693-40864937 | Spleen | SE_53508 | chr1:40865270-40866485 | Spleen | SE_53508 | chr1:40867003-40867753 | Spleen | SE_53508 | chr1:40868281-40869013 | Spleen | SE_55131 | chr1:40865492-40865987 | Thymus | SE_58445 | chr1:40828930-40871082 | Ly1 | SE_59998 | chr1:40841808-40870673 | Ly4 | SE_62202 | chr1:40838568-40871500 | Tonsil |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 5 | Chromosome | Start | End |
chr1 | 40865600 | 40866400 | chr1 | 40868400 | 40868800 | chr1 | 40866111 | 40866454 | chr1 | 40866431 | 40866538 | chr1 | 40867728 | 40867837 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I040398 | chr1 | 40864474 | 40871496 |
|
Enhancer Sequence | AAGGATTTAC TTAGTTCTTT TGTTTTTTTG AGATAGGGTG TCAATATGTT GCCCAGGCTG 60 GCCTCAAACT CCTGGGCTCA AGTGATCCTC CAACCTCAGC CTCCTGAATA GCTGGGACTA 120 CAGACATGTG CCACTGCACC TAGAATACTT AGTTTTAATT AATCTTTAAG CAAATGTTGC 180 TTCCCTGCTA TGTTCAAGGA ACCATGCTAT GCCGTGAGTA TATGATAGTG AATGTTACAG 240 GTCTGGTGAC AGCTCTTGTG GCACACATAG TTAAGCGGGA AAGACATCTT AAACAATCAA 300 ATAATTAGAT AGTAACAAAA TATGGTATGA TTTAGAAAAA GTAAAGGGTG GCCAGGCACA 360 GTGGCTCACT CCTGTAATCT CAGTGCTTTG GGAGGCCAAA GTAGGAAAAT CACTTGAGGC 420 CAGGAGTTCA AGACCAGCCT GAGCAACATA GTGAGACCCT GTCTCTTTTT TATTTCATTG 480 ATTTATTTTT ATTTTTATTT TTTTCAGACA GAGCCTTGCT CTGTTGCCCA GGCTGGAGTG 540 CAGTGGTGGG ATCTCGGCCC ACTGCAACCT CCGCCTCCTG GGCTCACGTG ATTCTCCTGC 600 CTTAGCCTCC CAAGTAGCTG GGACTACAGG CATGTGCCAC TACGTGTGGC TATTTTTTTT 660 TTTTTTTTTT TTTGTATTTT TAGTAGAGAT GGGGTTTCAC CATGTTGGCC AGGCTTGTCT 720 CAAACTCCTG ACCTCAGGTC ATCTGTCCAC CTCTGCCTCC CAAAGTGTTG GGATTACAGG 780 CGTGAGCCAC CGTGCCTGGC CCATTTCTTT TTTTTTTCTT TTCTTTCTTT CTCTTTTTTT 840 TTTTTCCTGA CTCTTAACAC CACTCAATGA CCCATCTTTA CAAAAATAAA AAATTCAGCT 900 GAGCGTGGTG GCTCATGCAT CTAGTCCCAG CTACTTGGGA GACTGAGGTG GGAGGATTGC 960 CTGAGCCTGA CAGCCCAAGG CTGCTGTGAG CTATGATCGC ACCACTGCAC TCCAGCCTGG 1020 GTGAGAGAGT AAGACCCTGT CTCAAAAAAA AAAAAAGAAA AGAAAAGAAA GAGTGAAAAA 1080 AAGAGTAAAG GGTAAATGAA AGTTCATAAC CTTTAAAAAA AAAGTCCTTA TCTTTTAGAG 1140 ATATATGCTG AAGTATATAC AGATGAAATG GTATGATATT TAGGATTTGC TTCAGAATAA 1200 TCCAGGTTGG AGTTGAGGGG CAGTGGGTGG GAGTATAGCT GAAACAAAAT TGGCTAGGAG 1260 TTGATAATTG CTGAAGCTCA TGGTTAATTA TGCTCTGCTT TCGTTTGTTT GAAATTTTCT 1320 GTAAGGTAAA AACCAAAAGA AAGGGTAGAA GAGATGTTAC AGTCGGGTTT AGACTGGGGA 1380 GCCAAGGAAA GACTCCTTTG AGGAAGAAAC ATTTCAGCTG AGACCCTTGT GATGTATAGG 1440 AGTTGGCCAG GCTGCAAGTG GCATTTGGCA GTTAGGGAAA GAGTTTTTTT AGGCAGCAGG 1500 AGCAGCATGT ACAAAGTCCA GCAAGCCCTG AGGAAGGAAC ATGTTGGTCC CTTGAGGAAA 1560 TGAAAGAAGG CTGCTACCAT AGGAATTGAG AGGCTGCGGA AGGAGGCATG GGCTAGACCT 1620 TTAAGACCTT GGAAACTATG TTAAGGATTT TGTTATTTAA TCCAATAGTA ATAGAAGAAT 1680 TTTAAGCAGC ACAATGTGGC TTTGCTTCTT TAAGAGCTCA AGTTGGCTGT TTGGTGGAGA 1740 ATGGTTTTGG TTTGGGCTCA AGGGAGAAGA GAATGTAAAA GTGGAGAGAG AGCTATTAGG 1800 AGGTTATTGC AGTGGTCCGA AAGAGTCTGG TGGCTTTAGA TTACAGAAAT AGTGATACAG 1860 ATGGAGAGAA GAGATACTGA TTTGACAGAT ATTTTTGTCT TGGTGATGTG GGGGCTGAAG 1920 GAGAGAGGTT TCATGATGCA TAATTTTCTG ACTGACGCAA TGGAATGGAT GGAGGTGTAG 1980 TTGACTAAGA TGAAGAAAAA AGGAAGAGAT TTTGTAGCAA GAGATTGAGA GCTTAGTTTG 2040 GAATATGCTA TTCAGAAAAT GTGCACCAAT TTACATATTT ACCTTTGTGT ATGAGACTAC 2100 ATGGAAGGTT TATATTTAGA GGTGTGATCT GTACAGATTT GTGTTTTAGA AAGATTATTC 2160 TGGTGGTGGG ATTCTGGAGA CTAATTGCTT GTTAGTCTGT GAGCTTTTTG AATTGAGGAA 2220 TCTCATCCTT ATTTTCTCTG CCTTTGTATC CCCAGTACTT AGCAGGCAAA TTGCTTGGCA 2280 CATAGGTACA CAATAAATAA TGTTAAGAGA ACCAATGCTG GTTGGGCGCG GTGGCTCACA 2340 CCTGTAATCC CAGCACTCTG GGAGGCCGAG AAGGGCGGAT CACTAGGTCA GGAGATCGAG 2400 ACCATCCTGG CTACCAAGGT GAAACCCCGT CTCTACTAAA AATACAAAAA CAAAATTAGC 2460 CGGGCGTGAT CGCGGGCGCC TGTAGTCTCA GCTACTCGGG AGGCTGAGGC AGGAGAATGG 2520 CGTGAACTCG GGAGGCGGAA CTTGCAGTGA GCCGAGATCG CGCCACTGCA CTCCAGCCTG 2580 GGTGACAGAG CGAGATTCCG TCTCAAAACA AACAAACACA CACAAAAAAG AACGAATGCT 2640 TATAGGTGAG ACATGAGGTC TAGGTAGAAA TGGATAGATT CTGGAAAAGT TTCCAAGATA 2700 GATTCCACAG GATTTGGATG GAAGATGGGA AAGTTCTCTC CCTTCGCGTA GCCTGCCCGT 2760 TGAACTTTTT GACAGGTCCG TTATGCCAGC AGGTCTAAAT ATAGGTAGCC ATCAATTTAT 2820 CAATGTTTTT TCCTCCTCAA TATTTATTTG TTTGGAACTC CATAGATTAG AACTCAATGA 2880 TATAATTATT ATAATATTAG TAGTAGCTTG AAGTCCTCCA TCACGCTAGT TCCCCTTTTC 2940 TGTCTGCTGA GTTGTCAATC CCAGAGCCCC TCTAATCCTG GCAGCTTTGG TGGTGGGGGA 3000 AGTTTCAGCA GCAAGAGGAA TTTGCAGCAG TAGTTACTCC GTATGTAGAA GCTGTCCAGA 3060 TGTTGAATAT AAGTTGGATA TTACGTATAT GCTTTTCATT TTACAAATGG AGACATAAGC 3120 CCTAGAGAAA CTTGTCAAAA TACATGCAAC AGGTCCGTGT AAACCCAGAT TTTTCCGATA 3180 CTGAACTGGT ACTTAGGACA GTTGATTTCT TGACTGATCA ACCAAATCCA TCTCCATCTA 3240 CTTTTTTCAT TTTCCCTGAT CCCTTATTGC AGAGTGATTC TATGTTAGTT TTAGTATTGC 3300 TTGATGCTGC CCACGCCTGC TCTTAGGCTC CTGTTGAATA TGTGCACTTA TGTGTGACCT 3360 TGTTCTTGTG TTGTGCCGAT CACTACCAGT TTACATCACT TGTCTATCCT CTTTGCTTTC 3420 AAAATTGTTT GGCATATTGC CTCTCAGCAT TTCTTTTCAT TTTAAATTTC AAAATGGCAT 3480 CTTTTATATT TTTTTCCTTG ATTGCCATGA CCAATGTGTA TTAAACAATT GGTTTATCTC 3540 TTTTTATTGA TACATAATAG ATGTACATGT TTTCAGGGTA CAAGTGATAT TTTGATACAT 3600 TCACATAATG TGTAATAACC AAATCATGAT AATGCTATAT CCGTCACCTT AGACATTTAT 3660 CTTTTCTTTA TGCTGGGAAT ATTTGAATTA TTCTCTTCTA CCTATTTTGA GATATATGGT 3720 AGATTATTAT TTACTATAGT CACTGTACTG ATTTATTGAA CACTAGATCT TATTTCTTCT 3780 AACTGTATTT TTGTATTTTT GTTTTTTTTT TGAGACAAGG TCTCGCTGTC ATCTAGGCTG 3840 GAGTGCAGTG GTGTGATCTC GGCTCATTGC AACCTCTGAC TCCTGGATTC AAGCAATTCT 3900 CCTGCCTCAG CCTCCCCAGT AGCTGGGATT ACAGGCACGT GCCACCATGC CTGGCTAATT 3960 TTTTGTATTT TTAGTAGAGA TGGGGTTTCA CCGTGTTGGC CAGGCTGACT AACTGTATTT 4020 TTGTACCCAT TAATCAACCT CATTTCTTCC TCCATCCGCC TACCCTTCCT GGCTTCTAGA 4080 ACACCGATTT ACTCTCTCTT CATGAGATCC ACTATTTTTT AACTCACTAA CATTTGCAGC 4140 AACATGGATG GAATTGGAGG TCATTATGTT AAGTGAAACA ATTGGTTTCA CTTGCATTTT 4200 TGCAAGTTTA CCAGATTAAA GTAGGCTGGC CTTATAGCAG CAATACCAGG TACTGTGGAA 4260 TCCAAGTACC CACCACTTAG GTTGACAGCC TTGGGCCTTC TTTCTTTGCC TGTGTAGTGG 4320 GGGCATATGC AAGCACAAGG GCAGGGTGGG GGTGTGTAGC AGAGAAAGGG AACAGGTGAG 4380 GGTTTAAAAA GTGCATTTTC AAGAAATATT TTAAGAGAAA TAAAGGAAGC TGCTTAAATT 4440 TTCATGTTGC CTAGAAGACT TTGAAATTGG GTCTAGGGTA AATTTCTTCT CTCTGTATTC 4500 AGTTCATTTT GGTTCTGATA TTTTAGGACC AGAACTCATA TTCCTTTTTA AAAAAGAAGC 4560 ACTCTGGCTG AGCGCGGTGG CTCACGCCTG TAATCCCAGG CCTTTGAGAG GCCAAGGCGG 4620 GTACATCACC 4630
|