EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS073-00300

Organism

Homo sapiens

Tissue/cell

GM19238

Coordinate

chr1:27949000-27949550

Target genes

Number: 9
Name	Ensembl ID

RP11	ENSG00000214973
AHDC1	ENSG00000126705
FGR	ENSG00000000938
IFI6	ENSG00000126709
RP3	ENSG00000230833
PPP1R8	ENSG00000117751
C1orf38	ENSG00000130775
RPA2	ENSG00000117748
ATPIF1	ENSG00000130770

dbSUPER

Number of super-enhancer constituents: 10
ID	Coordinate	Tissue/cell

SE_09188	chr1:27949083-27965280	CD14
SE_11718	chr1:27949316-27954182	CD20
SE_20210	chr1:27947866-27949072	CD56
SE_20210	chr1:27949159-27954255	CD56
SE_25377	chr1:27949159-27962785	DND41
SE_39434	chr1:27949314-27950800	Jurkat
SE_42462	chr1:27949373-27950745	Lung
SE_55520	chr1:27949470-27950525	Thymus
SE_62470	chr1:27916580-27996594	Tonsil
SE_66376	chr1:27949314-27950800	Jurkat

Enhancer Sequence

ATTTTTTATT TTTTAATTAT TTATTTATTT TTTTGAAATG GAGTCTCCCT CTGTTGCCTA 60
GGCTGGAGTG CAGTGGTGCA ATCTCAGCTC ACTGCAACCT CTGCCTCCCG GGTTCAAGTG 120
ATTCTTCTGC CTCAGCCTCT CAAGTAGCTG GGATTACAGG CATGCGCCAC CATGCCCTGC 180
TAATTTTTGT ATTTTTAATA GAGACAGGGT TTCACCATGT TGGCCAGGCT GGTCTCGAAC 240
TCCTGACCTC AGGTGATCCA CCCGCCTTGG CCTCCCAAAG TGCTGGGATT ACAGGCATGA 300
GCCACTGCAC CCGGCCGTCT ATTTCATTTT TATAGCCTCA GCTTAAAAAT CATCTCCTCC 360
AGGCCGGGTG CAGTGGCCCA ACACCACCCC CCTCAACCAG CACACAGTTG CAGTCACCCA 420
GGGTTTTTAT TGTTATGTAT ATGTGTTCCC AACTAGGCTG GAGCATTCTG AGGCTAGGGA 480
CCAGGTGGGA TTCCTGTCTG TGTCCTGCTC CCAGCCCAGG CAATGTTCTG ACTAGGTGGC 540
CTGGTCACTT 550