EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS073-00223

Organism

Homo sapiens

Tissue/cell

GM19238

Coordinate

chr1:23885510-23885610

Target genes

Number: 9
Name	Ensembl ID

E2F2	ENSG00000007968
ID3	ENSG00000117318
MDS2	ENSG00000197880
RP5	ENSG00000203589
TCEB3	ENSG00000011007
PITHD1	ENSG00000057757
LYPLA2	ENSG00000011009
PNRC2	ENSG00000189266
SRSF10	ENSG00000188529

dbSUPER

Number of super-enhancer constituents: 51
ID	Coordinate	Tissue/cell

SE_01721	chr1:23881555-23889029	Aorta
SE_02313	chr1:23880411-23890687	Astrocytes
SE_02990	chr1:23884492-23886038	Bladder
SE_03649	chr1:23885062-23885830	Brain_Angular_Gyrus
SE_04396	chr1:23879698-23893339	Brain_Anterior_Caudate
SE_05716	chr1:23884539-23893433	Brain_Cingulate_Gyrus
SE_06239	chr1:23879137-23896940	Brain_Hippocampus_Middle
SE_07293	chr1:23879799-23891454	Brain_Hippocampus_Middle_150
SE_08579	chr1:23879631-23889266	Brain_Inferior_Temporal_Lobe
SE_09076	chr1:23885282-23885587	Brain_Mid_Frontal_Lobe
SE_10300	chr1:23881528-23889322	CD19_Primary
SE_11050	chr1:23879915-23891055	CD20
SE_15327	chr1:23879943-23887180	CD4_Memory_Primary_7pool
SE_23281	chr1:23881538-23887207	Colon_Crypt_1
SE_23782	chr1:23880320-23886743	Colon_Crypt_2
SE_24936	chr1:23880181-23887578	Colon_Crypt_3
SE_26335	chr1:23880230-23891207	Duodenum_Smooth_Muscle
SE_27258	chr1:23879627-23889266	Esophagus
SE_27884	chr1:23881506-23891164	Fetal_Intestine
SE_28880	chr1:23879864-23891096	Fetal_Intestine_Large
SE_29676	chr1:23879484-23891086	Fetal_Muscle
SE_31953	chr1:23879692-23889254	Gastric
SE_33209	chr1:23884655-23885975	H1
SE_34477	chr1:23879886-23889360	HCT-116
SE_34689	chr1:23879661-23892014	HeLa
SE_37153	chr1:23883971-23890769	HSMMtube
SE_38016	chr1:23879610-23890311	HUVEC
SE_38999	chr1:23881526-23889831	IMR90
SE_41075	chr1:23879494-23889265	Left_Ventricle
SE_42328	chr1:23879505-23889255	Lung
SE_44435	chr1:23881522-23891710	NHDF-Ad
SE_45002	chr1:23880488-23890059	NHLF
SE_45797	chr1:23881239-23891813	Osteoblasts
SE_48755	chr1:23879678-23889199	Right_Atrium
SE_50077	chr1:23879574-23889256	Sigmoid_Colon
SE_51741	chr1:23881505-23890978	Skeletal_Muscle_Myoblast
SE_52549	chr1:23879678-23889244	Small_Intestine
SE_53706	chr1:23879544-23889256	Spleen
SE_54840	chr1:23879569-23891890	Stomach_Smooth_Muscle
SE_55341	chr1:23884491-23886753	Thymus
SE_56054	chr1:23880611-23891108	u87
SE_57520	chr1:23885507-23886083	VACO_503
SE_58372	chr1:23873313-23964782	Ly1
SE_63038	chr1:23880110-23890040	Tonsil
SE_63528	chr1:23881481-23891076	HSMM
SE_66590	chr1:23885045-23886056	Jurkat
SE_68324	chr1:23879596-23905390	TC32
SE_68325	chr1:23879596-23905390	TC32
SE_68477	chr1:23874949-23904689	TC71
SE_68478	chr1:23874949-23904689	TC71
SE_69046	chr1:23884460-23886904	H9

Enhancer Sequence

CTGATTAGAG GAAAAGAGGG AAGAGTTACG CGAGGCAATC GGGAGCTCCG AGGGTCCCGC 60
AGCATCCTTG CCTGGGTGTT CAGCCCTGTC CCGACTTCGA 100