Tag | Content |
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EnhancerAtlas ID | HS073-00197 |
Organism | Homo sapiens |
Tissue/cell | GM19238 |
Coordinate | chr1:19802210-19805160 |
Target genes | |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Nr5a2 | MA0505.1 | chr1:19804289-19804304 | GTTGGCCTTGAACTC | - | 7.29 | PBX1 | MA0070.1 | chr1:19802911-19802923 | CAATCAATCAAA | + | 6.18 |
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| Number of super-enhancer constituents: 39 | ID | Coordinate | Tissue/cell |
SE_00361 | chr1:19802985-19804456 | Adipose_Nuclei | SE_01199 | chr1:19802720-19804257 | Adrenal_Gland | SE_04046 | chr1:19802014-19804336 | Brain_Anterior_Caudate | SE_05833 | chr1:19801521-19805226 | Brain_Hippocampus_Middle | SE_07251 | chr1:19802953-19805485 | Brain_Hippocampus_Middle_150 | SE_08066 | chr1:19802672-19804379 | Brain_Inferior_Temporal_Lobe | SE_09593 | chr1:19800551-19814880 | CD14 | SE_10714 | chr1:19802454-19805661 | CD19_Primary | SE_12250 | chr1:19802072-19805474 | CD3 | SE_13780 | chr1:19802862-19805602 | CD34_Primary_RO01536 | SE_14589 | chr1:19801689-19805595 | CD4_Memory_Primary_7pool | SE_15716 | chr1:19802613-19805170 | CD4_Memory_Primary_8pool | SE_16772 | chr1:19802038-19805402 | CD4_Naive_Primary_8pool | SE_17553 | chr1:19800597-19813835 | CD4p_CD25-_CD45RAp_Naive | SE_18042 | chr1:19800983-19815154 | CD4p_CD25-_CD45ROp_Memory | SE_18410 | chr1:19800356-19813842 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19269 | chr1:19801969-19806261 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_21264 | chr1:19801983-19805636 | CD8_Memory_7pool | SE_21829 | chr1:19802483-19805231 | CD8_Naive_7pool | SE_22220 | chr1:19801825-19805679 | CD8_Naive_8pool | SE_22607 | chr1:19800179-19812105 | CD8_primiary | SE_23237 | chr1:19803317-19804067 | Colon_Crypt_1 | SE_23924 | chr1:19802639-19802941 | Colon_Crypt_2 | SE_23924 | chr1:19803562-19803976 | Colon_Crypt_2 | SE_25786 | chr1:19801757-19805583 | Duodenum_Smooth_Muscle | SE_26537 | chr1:19802505-19805527 | Esophagus | SE_29645 | chr1:19803362-19805147 | Fetal_Muscle | SE_31447 | chr1:19802308-19805352 | Gastric | SE_41031 | chr1:19802601-19804170 | Left_Ventricle | SE_42185 | chr1:19801749-19805404 | Lung | SE_45720 | chr1:19802951-19804259 | Osteoblasts | SE_47234 | chr1:19802920-19805189 | Panc1 | SE_48688 | chr1:19802526-19805197 | Right_Atrium | SE_50058 | chr1:19801658-19813904 | Sigmoid_Colon | SE_51211 | chr1:19802610-19805560 | Skeletal_Muscle | SE_52345 | chr1:19801632-19806547 | Small_Intestine | SE_53453 | chr1:19801782-19805512 | Spleen | SE_54550 | chr1:19802486-19805119 | Stomach_Smooth_Muscle | SE_62519 | chr1:19761354-19815005 | Tonsil |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr1 | 19802600 | 19804600 | chr1 | 19803336 | 19803680 | chr1 | 19803913 | 19804113 |
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| Number: 1 | ID | Chromosome | Start | End |
GH01I019474 | chr1 | 19801136 | 19806349 |
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Enhancer Sequence | CTGTATTAGG TTGAACCACA TGAAAGGCTG GTTAATTCAA CCCTTTTTTA CCTAGGAAAA 60 TGGCAACTTC ATATGGTTCA ACCTAATGGA GGGAGGGATT CTTACATTTA TTAAGGACCT 120 ACTGGACATT CAGTCATTCA TCTAACACCT GTAGAGCAAT GGCTGTGTCA GGGCCAGTGT 180 GTAACACTGC TTCAGCACCC CAAGACTGAG AGCCAGGATT TTTCATCTTC CCTCCTAAGG 240 ATAAGAAACA AACTTACCAG GCAGAACAAG GGTAACCAAC TCGATCTGCC TGAGCTCAGG 300 TAACTACTAA AACAGGCCAA TTTTGGCCAG GCATGGTGGC TTCACGCCCA TAATCTCAGC 360 ATTTTAGAAG GTCAAGGCGG GAGGATCCCT TGAGCCCACA AGTTCGAGAC CAGCCTGGGC 420 AACAAAGTAA GACTCTGTCT CTAAAAAATA AGTAGATAGA TAGATAGATA GATAGATAGA 480 TAGATAGATA GATAGATAGA TAGATAGATA GGCAGGCAGG CAGGCACTGT GGCACATGCC 540 TGTTATCCCA GCTGGCAGGC ACTGTGGCAC ATGCCTGTTA TCCCAGCTGC ATGAGAGGCT 600 GAAGGGGGAG GACTGCTTGA GCCGAGGAGG CTGAGGCTAC AGTGAGCCAA GATGGAACCA 660 TGCACTCCAG CCTGGGCAAC AGAATGAGAC CCTGTCTCAA TCAATCAATC AAACAGGCCA 720 ATTTTGTCTT TCCTCTCAGA ATCCCTGCAT CTTACACTGT ATATGGTGAC CAGGGCTGGG 780 ATGGGGCTTC ATAGGAAAAA GCCAAAGGAT CCTGCAAGGC TTTGTCACCC AATAGTCCCC 840 ATGGAGGGCT GTCGCAATGA TTAAGATGTG CTGCTGCCAC TCACGTCACA GGCAGGAAGA 900 GCCAGGGACA CTGACACTAC TGCACAAAGA ACCGTCCTGT CCAGTAGGCC AAGCCACACA 960 GTGGCCGACG CTAGGCTAAG ACTATCTCGC CCTTTCAGCT GAGTGGCTAT CTTTTGGAAA 1020 ACAGATTGCA GTTCACAAAG TTCCATCTCC TTGCATTTCA ACAAGTGGAA CCAAAAAAAC 1080 CTCCTAAACA AAACCCAGAC CTCTTCAGCC ACTGTGGCTA GACGTACAGG GGAACCTCTC 1140 GGCCCCAGTT TCCTCATCTA TAAAATAAAC ATCCCCATGG GCTGGTGCCA GAGAGGCAGG 1200 AGAGGGGAAT TCCATCAGCA TGCGCTGAGT GCGGTGGACC TGGACCTCCA TGGCAACTGC 1260 CATTAACTAG CTGGGGGCCC TTCAGCAAGT TACTACACCT CTCTGAGCTC CGGTTTCCTT 1320 ATCTGCAAAA TGAGGAAACA GACCTCACAG GGTTGGTGTT GAGAGAATTA CAGACAATGA 1380 CTGTGGGCAT CCGGTAAATA CTGGCAGAAG GAAGGGGCCA CTCTGTGAGT GAACACTCAA 1440 TACCAGCCTA CAGACTGAAG GTATCCTTCA TTTCATGGCA TCCCCTGATG CCTGTGCCAT 1500 GAGTGCACTC CTCAAGACCA AGAATGGACT CTGCTTAACC ACACCCCAGC CCATCCTCTC 1560 TGCCTGAACA AGGTCTCAAA TCTCAGGACA ACCAGGGGTC CACACCACCC TGTGCCCAAA 1620 AGAGATTTCA GGATAGAAGG TGTCTGGAGG GTATACACTG AGGACATGAC AACAGCTCAC 1680 ATTGGAAATT CTCAGCAGAG GAACTAACAG CCAAGCCTGG CCGCTGCTCT TTTGGAGTCT 1740 GAGTTCCTCA GTGTCTCAAG ACTTTTCACA CCAGAAGGAT GTGGTGGATT AAGGCTCCTC 1800 CTTCCAGTTT CTGAGCACAA AACTGCAACG CAGGGAGCCC ACTCATGTGA AACCAACGAC 1860 AGCCCATCAG GGTCAAAGCC TCACGACGGA GAAGCCTTCA GCAGCAACAC TCTACCTGCC 1920 AATCACTGCT GCAACTGAGA AGGGAAAAGG GCACCGGTAC CACCGGAAAA TGCCACTGGC 1980 TCAATTCTAA TTGGAAGCTC CAGCAGATAG GGTGCAATGC AAAAGCATCT TTTCATAACT 2040 TTTTTTGAAA GAAAGATGGG GTCTTACTAT GTTGCCCAGG TTGGCCTTGA ACTCCTGGGC 2100 CCAAGCGATC CTCCCACCTC AGCCTCCTGA GTAGCTGGGA CCACTGACAC ACACCACAGC 2160 ACCTGGTTTA ACTTTCTATT TTAAGTTAAA GTACTTCACT TGGTAAATAC GATGCCTGAA 2220 TCCACTTACT AGGGCTCTGA GACAGCAAGC CCAAACACTG TTAAATAAGA TACCGAGCCT 2280 AACTCAGGAG CATCATGCTG AGTTCAGCAC TAGAAGAGGA AGCTGCACAG AGCAATTGAA 2340 GCAGAGGGTG GAGAAGTGCG GGGTCTGAGC CAGTGGTAAC AACTGCTTCC AAGCTGCAAT 2400 GTGGTAAGAG CTCTTGAGAC CAGAAACCCT GGGCTGCTGT TTTCAGCAGT CTGGTGTTTA 2460 AACAGAATGA GCCCCTTAAG ACCACTCTCC TTGGGCAAGG GACTCTACAT CTTGGAGTCT 2520 CAGAAGAAGG AACTAGCACC TGCCTTCCAG GCTGGTTGGG AAGTTAAATG AAACACCACC 2580 TATCATCCAT CCATGTTAAC AGAATAACCA CAATAATAAG AGATAACACT CCTACTGCAC 2640 TTACAACGTG CCAGGCATCG TCTACACTTT CCACACATAA ACTCAGTCCT CACAATCATC 2700 ACTACGTGCC AGGTGAATGG CAACCACCAG GGTTGTTGCC TTACAAGACA CGTGACGACA 2760 CAACTGAAAA CCTAACACTA GAAAGTTGTA GGCAAAGGCT CCTGTTCACA AGCATCCAGA 2820 GATGTCAGAA ACATGTGGGG TGACCATAGG AGGAAGCACG GAAAAACGCA GGCAAGCAGC 2880 CTCCCTGCCT GTCTGACGCT GTGGACTTCC CCAGGCTGGT TCTGCACTCA CTCCTGAGTC 2940 TTTCAGAACT 2950
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