Tag | Content |
---|
EnhancerAtlas ID | HS063-00129 |
Organism | Homo sapiens |
Tissue/cell | GM18505 |
Coordinate | chr1:28570250-28572530 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
HES2 | MA0616.2 | chr1:28571814-28571824 | GGCACGTGCC | + | 6.02 | HES2 | MA0616.2 | chr1:28571814-28571824 | GGCACGTGCC | - | 6.02 | LMX1B | MA0703.2 | chr1:28572493-28572504 | AATTTAATTAA | + | 6.32 | NKX2-5 | MA0063.2 | chr1:28571045-28571055 | CTCAAGTGGT | - | 6.02 | SPI1 | MA0080.4 | chr1:28571297-28571311 | AACTTCCTGTTTTC | - | 6.16 |
|
| Number of super-enhancer constituents: 4 | ID | Coordinate | Tissue/cell |
SE_15081 | chr1:28570203-28571725 | CD4_Memory_Primary_7pool | SE_15081 | chr1:28571965-28577001 | CD4_Memory_Primary_7pool | SE_21005 | chr1:28572183-28576988 | CD8_Memory_7pool | SE_29182 | chr1:28569155-28576849 | Fetal_Intestine_Large |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr1 | 28572183 | 28572244 | chr1 | 28572300 | 28572395 | chr1 | 28570278 | 28570803 |
|
Enhancer Sequence | TTTTTAAGTA GCTGGATTTG ATGGCATTCA GATGTAGTCC CAGTTACTCC AGAGGCTGAG 60 GCAGGAGTAT CACCTGAGCC CAGAAGTTTG AGGTTACAGT GAACTATGAT TGCACAACTG 120 CACACCAGCC TGGGCAACAA AGCAAGAACC TGTCTAAAAT AAGAAATAAA AGAACAACAA 180 AGTGACCAGT ATAGCTGGAG CAGAGTGAGC AAGCAGGAAA GACACAGGAA ATAAGGGGCA 240 AGAGCTGTAT GTGAAGTTGC ACACACCCTG TAGCAGCAAA ATTTCTACTT CTGGACACTC 300 CATTCCATTT GGTTTGATCC AATTGGCTGA CTTTGGCCTG GTCTTATCAA GAAAAATAAA 360 TGCCTCAAGT TAATGAGTGA ACAAGCAAAT GTGTTAGTTA GAAAAGGCTG GATAATGACA 420 TAAGAAATGC TAGTTGTTAA GTCTCATTCT GCCTGCCTTA CACTTTTACC TTGAGGAAGT 480 GTGTGTGTGA GCAAGGGTGA GCAAGAGTGG AAGGAAACAA AGATGAAAGG GGGAAAGCAC 540 AAGACTATCA AGGAGCTTTT TTTTTTTTCC TTTTTTTTTT TTGAGACAGA GTCTCACCCT 600 GTCACCCAGG CTGGAGTGCA GTGGCACAAT CTCAGCTCAC TTCCACCTCC GCCTCCCAGA 660 TTCAAGCAAT TCTCCTGCCT CAGCCTCCAG AATAGCTGGG ACTACAGGCA TCTGCCACCA 720 CCCCAGCTAA TTTTTTTGTA TTTTTAGTAG AGACGGGGTT TCACCATGTT GGCCAGGCTG 780 GTCTCGAACC TGGACCTCAA GTGGTCCACC CATCTCGGCC TCCCAAAGTG GTGGGATTAC 840 AACTGTGAGC CACCGCACCC AGCCAATCAT GAAGCTTTGA ATACCATGTT AAGGAATCAT 900 GACCCTGTCC AACAGTTTTG AACTCAAGTT GCTACAGGGG CCAGGCAGGT AATGTAAATC 960 ATCAAGTCTT CCATTCGTTA CTGTTACGGG AAGTGAGAAA CCAAGTCTGG TTTGTGGGAC 1020 CCTCGAATGC AGTCTCAGTG TTACCAGAAC TTCCTGTTTT CCAAGGGAAA TCATAAATTG 1080 GAGATTTTAA AATCTTAGTA AATTCTTCAA ACCCAGAAGA CTGAATAATA TATATTAAGT 1140 AAACCAAATT CTGACCCATC GCATGTCCAA GTACAACCAG GACAATGCAA GACAGAAAGA 1200 GTTTTGTGCC CGGAAGTGTC TGGGTCAGAG TATTTTTGGA TGTCTTTGCT TATCTGAGCT 1260 ATTTATATTT GCCTCTCTTG TCACCTGTCT GATCCTGGCA GCCAGATTTT GGCCATTACT 1320 CAGCTCTGTT CTCACACACA CCGACACCCC CACAAGGATA GCACAGGCCC ATCTTAGGCA 1380 TCAATAATGT TCACAGAAAC AAACTTTCAA GAGTTTCGGC CAGGCGTGGT GGCTCACGCC 1440 TGTAATTCCA GCACTTTGGG AGGCCGAGGC AGGCAGATCA CGAGGTCAGG AGATGAAGAC 1500 CATCCTGGCT AACACGGTGA AACCCTGTCA CTACTAAAAA TACAAAAAAT TAGCCGGGCG 1560 TAGTGGCACG TGCCTGTAGT CCCAGCTACT CGAGAGGCTG AGGCAGGAGA ATCACTTGAA 1620 CCTGGGAGGT GGAGGTTGTG GTGAGCCGAG ATAGCCCCAC TGCACTCCAG CCTGGGCGAC 1680 AGAGGGAGAC TCCATCTCAA AAAAAAAAAA AAAGTTTTAC AATTAGCATT AAGAGTCTTT 1740 TGTTTTTTGG GTTTTTTGTT TTGTTTTGTT TTGTTTTGAG ATGGAGTTTT GCTCTTATTG 1800 CCCAGGCTGG AGTGCAATGG CGCGATCTCG GCTCACCGCA ACCTCTGCCT CCCGGGTTCA 1860 AGCGATTCTC CTGCCTCAGC CTCCCGAGTA GCTGGGATTA CAGGCATGTG CCACCACGTC 1920 CGGCTAATTT TGTACTTTTA GTAGAGACGG GGTTTCCCCA TGTTGGTCAG GCTGGTTTCA 1980 AACTCCTGAC CTCAGGTGAT CCGCCCACCT CAGCCTCCCA AAGTGCTGGG ATTACAGGCA 2040 TGAGCCACCG TGCCTGGCCC AAGAGTGTTA AAGTCTGGTG CAGTGGCCTG TAGTCCCAGC 2100 TACCCCAGAG GCTGAAGCAG GAGGATCATG TGAGCCCAGG AGTTTGAGAC CAACCTGGGC 2160 AACACAGCAA TACTCCCTCT CTTAAAAAAA AAAAAGCCTT AAATTTATTT GTTCATAGTC 2220 TTCAACTCAC GAATTTTTCT AGGAATTTAA TTAATCAGGA ATATAATTAT TTAAGAGTTT 2280
|