| Tag | Content |
|---|
EnhancerAtlas ID | HS061-01891 |
Organism | Homo sapiens |
Tissue/cell | GM12892 |
Coordinate | chr1:198610470-198611040 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Crx | MA0467.1 | chr1:198610718-198610729 | CTAATCCTCTT | - | 6.62 | | RFX5 | MA0510.2 | chr1:198610740-198610756 | CTTTGCCATGGCAACT | + | 6.14 | | RFX5 | MA0510.2 | chr1:198610740-198610756 | CTTTGCCATGGCAACT | - | 6.35 |
|
| | Number of super-enhancer constituents: 33 | ID | Coordinate | Tissue/cell |
| SE_09213 | chr1:198606841-198613669 | CD14 | | SE_10200 | chr1:198610272-198611463 | CD19_Primary | | SE_10874 | chr1:198579403-198671825 | CD20 | | SE_11822 | chr1:198604591-198613213 | CD3 | | SE_12868 | chr1:198607032-198612241 | CD34_Primary_RO01480 | | SE_13336 | chr1:198607066-198613281 | CD34_Primary_RO01536 | | SE_14067 | chr1:198607098-198612884 | CD34_Primary_RO01549 | | SE_14382 | chr1:198604432-198616877 | CD4_Memory_Primary_7pool | | SE_15405 | chr1:198607129-198613327 | CD4_Memory_Primary_8pool | | SE_15805 | chr1:198606601-198614589 | CD4_Naive_Primary_7pool | | SE_16283 | chr1:198606934-198614133 | CD4_Naive_Primary_8pool | | SE_16874 | chr1:198604898-198613404 | CD4p_CD225int_CD127p_Tmem | | SE_17305 | chr1:198604496-198661531 | CD4p_CD25-_CD45RAp_Naive | | SE_17776 | chr1:198604306-198639795 | CD4p_CD25-_CD45ROp_Memory | | SE_18245 | chr1:198604293-198639821 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_19200 | chr1:198606995-198616941 | CD4p_CD25-_Il17p_PMAstim_Th17 | | SE_19995 | chr1:198604650-198613437 | CD56 | | SE_20746 | chr1:198606969-198612999 | CD8_Memory_7pool | | SE_21460 | chr1:198606982-198613455 | CD8_Naive_7pool | | SE_21924 | chr1:198607022-198616955 | CD8_Naive_8pool | | SE_22285 | chr1:198604395-198665148 | CD8_primiary | | SE_25576 | chr1:198607175-198612135 | DND41 | | SE_31026 | chr1:198606761-198611923 | Fetal_Thymus | | SE_39433 | chr1:198606180-198613116 | Jurkat | | SE_49861 | chr1:198604575-198613933 | RPMI-8402 | | SE_58290 | chr1:198564715-198671046 | Ly1 | | SE_59080 | chr1:198588455-198654514 | Ly3 | | SE_59608 | chr1:198585244-198671628 | Ly4 | | SE_60444 | chr1:198588133-198656098 | DHL6 | | SE_61004 | chr1:198588339-198656148 | HBL1 | | SE_61429 | chr1:198565046-198658062 | Toledo | | SE_62210 | chr1:198565497-198666528 | Tonsil | | SE_66263 | chr1:198606180-198613116 | Jurkat |
|
Enhancer Sequence | ATGTTTCATT TTAACGTGTT AAAATTAGTT TAGTGCCTAC AGGAAATAAT AAACTTTTGG 60
GGAACAAAAT TTATATTGTA TGCTGTAAAG GCATAAAGAA ATAGAGCCAA ATGTAGAGAG 120
CCATCAATGG TAACTCTATG CATAATTCAA ATATTTTATT TAATATCTAA AATGCACACA 180
CGGACAAGGC CAAAGTTAAT CTTTGCCACG GCAACAACCA GGCAGGGTTC AGTTTTACTC 240
AAGACTTCCT AATCCTCTTG CTCTGTGCCT CTTTGCCATG GCAACTGGAA GCCAAACTTT 300
GTTTAGAATT TCTAAATAAT GTTAGGGGAC AATGATGGTT TTAAGAAGGC AGGTGAAGGT 360
GAGTGTTCTC TGGTTCTAAT AAAGTTGTAA TGCCAGGCAG ATCTACCACA CTATAGCATG 420
GCAGTTAGGA GTATATGAGT TATGGTATGT GAGGTATATG ATGAGTTTTG TTATGAGTCA 480
TAACAGTTAA GACTCATTTC CTGGACATAA TTCTTCATTT TTCCATCTGT ATTAAAAATA 540
TATATCTCAT GTTATAAACA TGGACTGTGC 570
|
