EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS061-00593

Organism

Homo sapiens

Tissue/cell

GM12892

Coordinate

chr1:31210550-31211780

Target genes

Number: 3
Name	Ensembl ID

RP5	ENSG00000186056
MATN1	ENSG00000162510
LAPTM5	ENSG00000162511

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RUNX1

MA0002.2

chr1:31211701-31211712

AAACCACAGAC

6.62

dbSUPER

Number of super-enhancer constituents: 14
ID	Coordinate	Tissue/cell

SE_09454	chr1:31210764-31213257	CD14
SE_10168	chr1:31210418-31212362	CD19_Primary
SE_10991	chr1:31200236-31237145	CD20
SE_17372	chr1:31209247-31236610	CD4p_CD25-_CD45RAp_Naive
SE_17902	chr1:31209743-31235259	CD4p_CD25-_CD45ROp_Memory
SE_18435	chr1:31206875-31235130	CD4p_CD25-_Il17-_PMAstim_Th
SE_19221	chr1:31209510-31210693	CD4p_CD25-_Il17p_PMAstim_Th17
SE_19221	chr1:31210804-31212316	CD4p_CD25-_Il17p_PMAstim_Th17
SE_20090	chr1:31210134-31213248	CD56
SE_22484	chr1:31209552-31213259	CD8_primiary
SE_40461	chr1:31210623-31211621	K562
SE_60651	chr1:31202709-31239413	DHL6
SE_61144	chr1:31205054-31253025	HBL1
SE_62248	chr1:31201545-31253778	Tonsil

Enhancer Sequence

AACAGATTTG GGGGCCACAT CAATGTCTCT GGACATAAGG AATTCCAACA GCACCCACAC 60
ATCCGGGAAT AATGATCCCA CCCTCCACAC ACACACGAGC ACAGCGTGGC ACAGCCGTCA 120
CCTTGGTCGA CCGCCACAGC AGCCTTAGGA AGCAGGTGCT ACCTTCAGCC CCATCCCACT 180
GACGGGCAAA CCAAGAAAAG CCAAGTGGCT ACTATCTCCA GATCTGCTTC CCAGGCTGGC 240
GCACCGGCCC ATCCCCAGCT GGCAGGTGTC AGCTGCCCAT GGGCCACACC TATGCTCTTC 300
TCTACAAGAT CATTTTGGCT GACAGGGACC ACCTAATCCA CTAATACCTG GGAGGTTACA 360
TTCCCTCCCC TAGGGGCAGC TTGAAACCAA TGACTGATGC AGGGGAACTC GCCCTAGGTG 420
AGACTGCCTC TGTGGTCATT TGCAAATATT ACCACACATT CTTTGAGACG CCTCCCTTCT 480
AAAGGTGGTG TTTATTTCCT CTCCCCTTGA GTGTGGGCTG GACTTAGCAA CGCACTTCTA 540
ACTAACAGAA TGTGGCAGAA GTGATAGAAG TCTTAAAAGA CACTGCCTTT CCTCCTTGCT 600
TATCTCTTAC ATCACTCCCG CAGGGGAAGC CAGCAGCCAT GTCAGGAGAG CACTCAAGCA 660
GCACTACTAC AAGTCCACAG GATGAGGAAT TAGGCAAAGA GCCCACGCCC TGTGAGTGAG 720
CCACCAGGAG TTCATCCTTC AGATCTAATC AAGCCCTCAG TTGTCCACAG CCCCAGGTAC 780
CATCTCTGGT GCAGCCCCAC CAGAGTCCCT GAGTCAGAAG AACCCAGCTA AGCCACTCCC 840
AAGCTCCTGA TCCTCAGAAG CTGTGTGAAA TAATAAATGT TTATTGCTTT AAGCCATGAT 900
GCTTAGAGAT AATTCATTAG ACAACAATAA AAACTGATAT TATGTCTGTG TTGCAATTCA 960
CATGCCAAAG CCCTCTCTGG GATCATGCAG GGCTGCTCCT ACAGCCACAT CTTTGCTTCT 1020
TTGCTTGGCT TCCTCCTTTT CTCGAACCTG CCTTCCTCAC TCCTGACAAG TTTCTTCCTG 1080
AGAGGGCTCC CTCAATAAAT CACCAGCACA AGAATCTTCC TCCCAAGCTC CAACTCCAGG 1140
GAACCTGGCC TAAACCACAG ACACACAGAG ACGTGAAGTA ACCTGTTCAA GGCCACACAG 1200
CCAGCAAATG GGCATGGTTC CCTGCCCCAG 1230