Tag | Content |
---|
EnhancerAtlas ID | HS061-00527 |
Organism | Homo sapiens |
Tissue/cell | GM12892 |
Coordinate | chr1:27829750-27831400 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
EWSR1-FLI1 | MA0149.1 | chr1:27830565-27830583 | GGAACGAAAGCAGGAAGA | + | 6.13 | Nr2f6(var.2) | MA0728.1 | chr1:27830156-27830171 | CGATCTCTTGACCTC | - | 6 | ZNF263 | MA0528.1 | chr1:27831218-27831239 | TGAGAATGGGGAGGAGGGAGG | + | 6.04 |
|
| Number of super-enhancer constituents: 32 | ID | Coordinate | Tissue/cell |
SE_02913 | chr1:27830213-27831026 | Bladder | SE_02913 | chr1:27831120-27832355 | Bladder | SE_05196 | chr1:27829210-27833352 | Brain_Cingulate_Gyrus | SE_05814 | chr1:27829181-27832931 | Brain_Hippocampus_Middle | SE_06945 | chr1:27829261-27832857 | Brain_Hippocampus_Middle_150 | SE_07770 | chr1:27829738-27832662 | Brain_Inferior_Temporal_Lobe | SE_23188 | chr1:27830280-27832092 | Colon_Crypt_1 | SE_24033 | chr1:27830527-27830952 | Colon_Crypt_2 | SE_24033 | chr1:27830969-27832275 | Colon_Crypt_2 | SE_24711 | chr1:27830217-27832142 | Colon_Crypt_3 | SE_25901 | chr1:27830171-27832637 | Duodenum_Smooth_Muscle | SE_26518 | chr1:27829401-27830028 | Esophagus | SE_26518 | chr1:27830129-27832742 | Esophagus | SE_27625 | chr1:27830080-27832462 | Fetal_Intestine | SE_28547 | chr1:27830055-27832555 | Fetal_Intestine_Large | SE_29557 | chr1:27829444-27832772 | Fetal_Muscle | SE_31394 | chr1:27830159-27832397 | Gastric | SE_33477 | chr1:27830354-27831735 | H2171 | SE_34755 | chr1:27830079-27832086 | HeLa | SE_35950 | chr1:27830256-27832335 | HMEC | SE_36974 | chr1:27829579-27833069 | HSMMtube | SE_39896 | chr1:27830278-27832548 | K562 | SE_40593 | chr1:27829483-27832634 | Left_Ventricle | SE_42106 | chr1:27829456-27830064 | Lung | SE_42106 | chr1:27830105-27832560 | Lung | SE_48058 | chr1:27830093-27832593 | Psoas_Muscle | SE_48567 | chr1:27830115-27832554 | Right_Atrium | SE_50130 | chr1:27830153-27832341 | Sigmoid_Colon | SE_51091 | chr1:27829612-27832640 | Skeletal_Muscle | SE_52467 | chr1:27830150-27832427 | Small_Intestine | SE_62718 | chr1:27801410-27856116 | Tonsil | SE_65253 | chr1:27830186-27832347 | Pancreatic_islets |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I027502 | chr1 | 27828889 | 27832715 |
|
Enhancer Sequence | AAGGCCCAGA GGCAAGAGAA AAAATGATGG CTCACTGGGG GAAAAGGACA TCCTTTGATG 60 AGGGCTGGTG AGTGGGGAGA GGTGGAGACA GAGGATTGGA CTGGATTCTG GGGGTGCTGG 120 GGAGGCATGG AAGAGTTCTA ACAGAGATAT GTCACAATCA AATGTCCCTT TTGCAGGATC 180 ACTCTGAATT TTTTTTTTTT TTTTTGAGAT GGAGCCTGGC TCTGTTGTCC AGGCTGGAAT 240 GCAGTGGCGC GATCTCGGCT CACTGCAGTC TCCGCCTCCC GGGTTCAAGC AATTCTCCTG 300 CCTCAGCCTT CCAAGTAGCT GGGACTACAG GTGCGCACCA CCACGCCTGG CTAATTTTTG 360 TATTTTTAGT AGAGACGCGG TTTCACCATG TTGGCCAGGA TGATCTCGAT CTCTTGACCT 420 CGTGATCTGC CTGCCTCGGC CTCTCAGAGT GCTGGGATTA CAGGCGTGAG CCACCGCGCC 480 CAGCTCACTC TGAATATTTT GAGCGACCTA TTTATGATTT GAATTTATTC ATTCGAGAAG 540 CACCCCAACA TACCTCCTAT ATGTCAGGCA TGGACCCAGG AACTGTGACT ACAACAGATA 600 ATTAGGGGTT GGTTCCTCAG ACAGGACAAA GGGCAGGACA CTGAGTGCCA CCTCTACAGA 660 GGGGTCTGAC TGGATAAAGA CAAAGTGTGA AAGTGTATGA CTTTCACAAA ACAAGAAAGC 720 CAAGCCCCGT GTGGGGTGAC AGGGTGCAGG GATGGGAGAT GGCACTCAGG GAGCTAGCAC 780 TGGACAGGCC AGTGATTCCG AAGACAGAGG ATAAAGGAAC GAAAGCAGGA AGAGAGGGAA 840 TGAGTTATGG GTGAAATATT CGGATCCTGT AGCCTCCATA GAAGGTGGCC AAGTGGGCAG 900 GGGGCAAAGT CCCAGCCAAG CCCCTCAGCA CCCCCATGTG TTCCCAGCCC TGCTGAGCCC 960 TGCAGCTCGT CTCCTCCTGG CTCCAAAAGT CAGACCAAAC CCCGGAGAAC AGAGGCGGGT 1020 GAGGAGGGGG CGGTGGGGTA CAAGCCCAGG CCTCTCACCC CAGCAAAGCC TGCCTTCCCA 1080 GTGCCTGGGG CCAACCCAGC TGAGAAGCCA GAGGTTACAG GGAAAGGATT AAGGAGTTGC 1140 TTGCTTTTTT ACCCAAACTC TGCTGTATTT CTCTGTCTTT CTTCAATCTC TCTCTCTCTC 1200 TCTTTTTTTT TAAAGAAAAA TATTCCTGTA CACGCACCCA GAGGCTTTTG CAGGAGGCGG 1260 CTGTTGGAGA ACTGGGAAAA CAAGCCAAGA AACAAGAGAG AGGAAAAAGA CCACGCCTCG 1320 CCTGGCAGAT TCCTAATGGC CCAGGAGACC TGAGGCTTTA CAGTGGGAGG CCGGTGGGGG 1380 CTGGCTCGGG TGGGAGGGAA GGGCAGGCCG AAGGACAGCC ACTTGCTGGC TGGTGACCTT 1440 GGGCGGGATA CTGCCTGCTT CCCTCTGGTG AGAATGGGGA GGAGGGAGGC AGGGGCAGGC 1500 CTGGCCGGCT GAGGTCACAG GAAGGCCCCT TCCAGCCTGA AACGCGATCT CGGGATGTGG 1560 GGCCTGCCAA CCTGCAGCGA CCCTGGGCCA GCAGAGATGA AAGGCTGCCT GTCCCCAGCT 1620 TCCGGACCCC CAAGGCCCCA CTGCCTCAAA 1650
|