EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species
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EnhancerAtlas 2.0
Tag
Content
EnhancerAtlas ID
HS060-00754
Organism
Homo sapiens
Tissue/cell
GM12891
Coordinate
chr1:28832600-28832730
Target genes
Number: 23
Name
Ensembl ID
RP5
ENSG00000228589
PTAFR
ENSG00000169403
MED18
ENSG00000130772
PHACTR4
ENSG00000204138
RP1
ENSG00000229820
RCC1
ENSG00000180198
SNHG3
ENSG00000242125
SNORA73A
ENSG00000201808
SNORA73B
ENSG00000200087
snoU13
ENSG00000238821
PRDX3P2
ENSG00000231468
TRNAU1AP
ENSG00000180098
SNORA61
ENSG00000207311
SNORA44
ENSG00000207314
SNORA16A
ENSG00000207070
SNHG12
ENSG00000197989
RAB42
ENSG00000188060
TAF12
ENSG00000120656
RP11
ENSG00000229388
RNU11
ENSG00000209804
GMEB1
ENSG00000162419
YTHDF2
ENSG00000198492
EPB41
ENSG00000159023
TF binding sites/motifs
Number: 1
TF
JASPAR ID
Coordinate
Motif Sequence
Strand
-Log10(p-value)
IRF1
MA0050.2
chr1:28832707-28832728
ATTTACTTTTTTTTTTTTTTT
+
6
dbSUPER
Number of super-enhancer constituents: 14
ID
Coordinate
Tissue/cell
SE_13857
chr1:28831352-28838041
CD34_Primary_RO01536
SE_15100
chr1:28831392-28838103
CD4_Memory_Primary_7pool
SE_21360
chr1:28831370-28837817
CD8_Memory_7pool
SE_34487
chr1:28831462-28837999
HCT-116
SE_35630
chr1:28831533-28837920
HepG2
SE_39972
chr1:28831732-28838143
K562
SE_65238
chr1:28831521-28838064
NHEK
SE_68319
chr1:28831355-28846288
TC32
SE_68320
chr1:28831355-28846288
TC32
SE_68321
chr1:28831355-28846288
TC32
SE_68525
chr1:28831484-28846339
TC71
SE_68526
chr1:28831484-28846339
TC71
SE_68527
chr1:28831484-28846339
TC71
SE_69103
chr1:28831754-28837755
H9
Enhancer Sequence
GTGTGATCCT TGGTAAGTGT GATCAGATGC TTGCCACCGG AGTTGTGGGT CTAATGCTAT 60
AGATCAGTAG CCGAGCTTCC CTAGGAAGAT CATATAGTAT TTTATTTATT TACTTTTTTT 120
TTTTTTTTGA 130