| Tag | Content |
|---|
EnhancerAtlas ID | HS059-03980 |
Organism | Homo sapiens |
Tissue/cell | GM12878 |
Coordinate | chr1:208004330-208006470 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| NFKB1 | MA0105.4 | chr1:208005402-208005415 | AGGGGATTCCCCA | - | 6.71 | | NFKB1 | MA0105.4 | chr1:208005402-208005415 | AGGGGATTCCCCA | + | 6.82 | | RARA(var.2) | MA0730.1 | chr1:208005268-208005285 | TGACCTCTGTGTGACCA | - | 6.3 |
|
| | Number of super-enhancer constituents: 31 | ID | Coordinate | Tissue/cell |
| SE_01610 | chr1:208003718-208006602 | Aorta | | SE_02940 | chr1:208003945-208006074 | Bladder | | SE_03907 | chr1:208003545-208007521 | Brain_Anterior_Caudate | | SE_06993 | chr1:208003570-208005482 | Brain_Hippocampus_Middle_150 | | SE_08580 | chr1:207991706-208006704 | Brain_Inferior_Temporal_Lobe | | SE_09440 | chr1:208003916-208007804 | CD14 | | SE_10475 | chr1:208004630-208006320 | CD19_Primary | | SE_11488 | chr1:207992533-208010277 | CD20 | | SE_12401 | chr1:208004637-208006256 | CD3 | | SE_13353 | chr1:208004754-208006344 | CD34_Primary_RO01536 | | SE_14644 | chr1:208004273-208007930 | CD4_Memory_Primary_7pool | | SE_17929 | chr1:208003706-208007813 | CD4p_CD25-_CD45ROp_Memory | | SE_18828 | chr1:207994794-208013240 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_20606 | chr1:208004352-208006469 | CD56 | | SE_24155 | chr1:208004812-208005329 | Colon_Crypt_2 | | SE_25829 | chr1:208003915-208006434 | Duodenum_Smooth_Muscle | | SE_26666 | chr1:208003798-208005871 | Esophagus | | SE_41597 | chr1:208003977-208004826 | LNCaP | | SE_42138 | chr1:208003616-208008639 | Lung | | SE_48593 | chr1:208003701-208006541 | Right_Atrium | | SE_49524 | chr1:208003918-208005343 | Right_Ventricle | | SE_50299 | chr1:208003929-208006142 | Sigmoid_Colon | | SE_52485 | chr1:208003912-208006536 | Small_Intestine | | SE_53314 | chr1:208003646-208008432 | Spleen | | SE_54764 | chr1:207991828-208013085 | Stomach_Smooth_Muscle | | SE_59011 | chr1:207980241-208007571 | Ly3 | | SE_61319 | chr1:207994376-208006461 | HBL1 | | SE_62794 | chr1:207980098-208006634 | Tonsil | | SE_65312 | chr1:208003968-208004591 | Pancreatic_islets | | SE_65312 | chr1:208004839-208005692 | Pancreatic_islets | | SE_65312 | chr1:208005804-208008071 | Pancreatic_islets |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I207830 | chr1 | 208003920 | 208007544 |
|
Enhancer Sequence | GACACACACT CAGAATGCCG CCACAGACAG GGAGCCGGAG CCAGGCGGCA GAGAGTGAGT 60
GACCTGGCAG ACGCTGGCCA AGAACACAGG GCTCCCCGAC CCTCAGGGTA AAGGAAGACA 120
AGCAAAGGCC AAGTTGAGTG CTGAATTCAC AGCACAAATG GAAGTGAACC CCAGCACCAA 180
CAGGGACTCC CGTGTGAAAT ACGCCCAAGG GCTGCACAGA GAGGGGCATG TTTGCATGGG 240
GGAAGGTCAG GCCTGCAACA GCAGATATTG TGACTAGGAT GCTCTGTTTG TAAGTAGATG 300
CTTTTTCCTG GACAGACACA GTCAGTCTGT CTCTCAGGCC AGAAATCCAG GCTCCAAAAT 360
GTCCTGCCCA AGCTGGCTCC CATCACCTCT TGGGAAAGTG AAACAGGCCA AAACATCTAT 420
CTTGTCTTAG GCCGCTAATC ATTAAATCTA AGCTCCCACC CCAGAGGGCT CACAACTCAG 480
CCATAAGCAA AACCCAGACT GGCAATAGCA CTGGCACCTG CTATCCTGAC TATGGGCTGG 540
GGCTGAGTGA ATGTGGCCAC TCTGCTAACC ACTGGTCACA GCTCCTGCTG CCTAAAATAC 600
AGGAGGACAA AGTCTTCTTG GGACTGAGGG AGTAACCCAA TGTGCCTCTT GGCTGGCTGC 660
TCAAAATCTT GGCCCTGCCA ATGGATGGAA ATAATTTCCA GAGAGACAGA GTGTGGTTGG 720
GCCATGTGAG AGGGACTTGA GGAGAACATT ACTCCATTCC TCAACAGCGG AACCTGTAGC 780
CTGTGCCAGG CCAGACATGG CCGGGATTGA GGGGTCTTGG CCAGACTCCC TCCAGGCACA 840
GGTTGGTGCC CTCAGACGCT GCTGCTGCTC TTGTGGGCAG GAGGAGATGT CTCTAGGGTA 900
GGAAGAACCT AGGCCTCTGA TGATTTATGG GTCTGTGCTG ACCTCTGTGT GACCACATGG 960
GTTTAGCACC ATGTGACTTA AAAATGGAGT CGCTTTCCTG CCTCACAACA AACTTCTGCT 1020
CTACTTAACT GAGTCAGATC TAGACAGCAG GAATCATAAA CACAAGTGGG GCAGGGGATT 1080
CCCCAAACAC TTCTGACTTG AACTTTCATT TCCATACTGC CTTATCCCCC AAGCAGGGGC 1140
ACGTCCGTAC CTGCAGCCTA GGACAGAGGA GAAAAGAGAC CAGGGCCATT ATGCATGGCC 1200
TGGGTGCAGG TCCGAGCTTT CAGCAAAGTG CCAGCTTTGC CAGGAGCAGG GACAAAACTT 1260
CCAGGGCCGA GACTCTCATT CAGGGGTGGG AGAGGAGCTG GGGACTGTCT AAAACATAAC 1320
AGTTAATATT TGGGATACGT TTTCATAATG TGAAACCATA CCAAAAGTAA AGTTCCACAA 1380
AACCTTTGAT GATGTGAATA CTTCCTCTGC ACTGGGAGGG GATGTTGACC AGAATCTTTG 1440
GGGGTGGGAG GCAGTCCTGT GGTTGATTTA TTTACTGAAG GTAGGTGTTG GAATTACACT 1500
CTTTTAGAGG GTTCAGCTCT CTGAAACCCC CTGGGACCAC TGGACAGCCA TTATTCTCAG 1560
GCTAGGATTT GACATAGGCC TCCGAGGCCA ATGTTCTTTC TCCAAAAGCA GCACAGCAAC 1620
AACAGCTCTG CCTTAAAAGA CAGAAGATTA CACTTAGAAG ATTTCTCCAA CGCCACATAC 1680
TTTGGAGGTG AGAGGAGTAC CCCATCACTC TCCCTCTGAA AACTTCAAAA CCTTCAGAGG 1740
CCAGGGTGAA TATTTAGAAA GCAGGCGGGT CCAACAGAAA GAACGGCCAT TGATCTATTC 1800
CAAAAAAATA ATGTGTTTGG GGCCCATGTG TCAGGTACAG CGCGAGGCAC TTTTTAAGGA 1860
GCTCCACCCT TGGCTGGCAG GAACTCCCTC GGTCAGCAGA GGCTGGTAAA CTAAGAAAGC 1920
AAGATGCTAG GAGGACAGCT GGCTCCTTAA TCCCACCCTG GCCCCCCAAA CAAGACAGCT 1980
CAAGTCTTGC CGGCCCTGGA GGCCCAGGCA CTTGGACATC ACTTGCTCTA TGCCTTTCTT 2040
GGGAGGCAGA GCTTAGTGGG GGTTGAGGAG AGATCTACAG GCTGAGTGCG CTCATGACAC 2100
AATCAAGAAG TTTCTGGGGC CAGGTGCGGT GGCTCACGCC 2140
|
